Gene : AT3G18670 A. thaliana TAIR10
Defline:  (1 of 2) PTHR24177:SF39 - ANKYRIN REPEAT-CONTAINING PROTEIN-RELATED Genomic Order:  1933
Name:  ? AT3G18670 Secondary Identifier:  ? PAC:19660212
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G18670 0.5kb upstream 0.5kb upstream 2837 true Chr3: 6424135-6426971 Arabidopsis thaliana
AT3G18670 0.5kb upstream 0.5kb upstream 500 false Chr3: 6426472-6426971 Arabidopsis thaliana
AT3G18670 0.5kb downstream 0.5kb downstream 2837 true Chr3: 6423635-6426471 Arabidopsis thaliana
AT3G18670 0.5kb downstream 0.5kb downstream 500 false Chr3: 6423635-6424134 Arabidopsis thaliana
AT3G18670 1.0kb upstream 1.0kb upstream 3337 true Chr3: 6424135-6427471 Arabidopsis thaliana
AT3G18670 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6426472-6427471 Arabidopsis thaliana
AT3G18670 1.0kb downstream 1.0kb downstream 3337 true Chr3: 6423135-6426471 Arabidopsis thaliana
AT3G18670 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6423135-6424134 Arabidopsis thaliana
AT3G18670 2.0kb upstream 2.0kb upstream 4337 true Chr3: 6424135-6428471 Arabidopsis thaliana
AT3G18670 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6426472-6428471 Arabidopsis thaliana
AT3G18670 2.0kb downstream 2.0kb downstream 4337 true Chr3: 6422135-6426471 Arabidopsis thaliana
AT3G18670 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6422135-6424134 Arabidopsis thaliana
AT3G18670 5.0kb upstream 5.0kb upstream 7337 true Chr3: 6424135-6431471 Arabidopsis thaliana
AT3G18670 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6426472-6431471 Arabidopsis thaliana
AT3G18670 5.0kb downstream 5.0kb downstream 7337 true Chr3: 6419135-6426471 Arabidopsis thaliana
AT3G18670 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6419135-6424134 Arabidopsis thaliana
AT3G18670 10.0kb upstream 10.0kb upstream 12337 true Chr3: 6424135-6436471 Arabidopsis thaliana
AT3G18670 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6426472-6436471 Arabidopsis thaliana
AT3G18670 10.0kb downstream 10.0kb downstream 12337 true Chr3: 6414135-6426471 Arabidopsis thaliana
AT3G18670 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6414135-6424134 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366883 5261 Brassicaceae View MSA
123838563 5264 Brassicales-Malvales View MSA
124346783 5266 SBM View MSA
124254356 5268 Malvidae View MSA
124074259 5270 Rosid View MSA
123753624 5271 Pentapetalae View MSA
122797775 5272 Eudicot View MSA
122051097 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351705 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.306        
cufflinks 3.104       High
cufflinks 0.21     Low  
cufflinks 2.257        
cufflinks 0.125     Low Low
cufflinks 2.104        

0 Strain