Gene : MYB45 A. thaliana TAIR10
Primary Identifier:  ? AT3G48920 Defline:  (1 of 3) PTHR10641:SF563 - MYB TRANSCRIPTION FACTOR-RELATED
Genomic Order:  3886 Name:  ? AT3G48920
Secondary Identifier:  ? PAC:19665078
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G48920 0.5kb upstream 0.5kb upstream 1670 true Chr3: 18138892-18140561 Arabidopsis thaliana
AT3G48920 0.5kb upstream 0.5kb upstream 500 false Chr3: 18138892-18139391 Arabidopsis thaliana
AT3G48920 0.5kb downstream 0.5kb downstream 1670 true Chr3: 18139392-18141061 Arabidopsis thaliana
AT3G48920 0.5kb downstream 0.5kb downstream 500 false Chr3: 18140562-18141061 Arabidopsis thaliana
AT3G48920 1.0kb upstream 1.0kb upstream 2170 true Chr3: 18138392-18140561 Arabidopsis thaliana
AT3G48920 1.0kb upstream 1.0kb upstream 1000 false Chr3: 18138392-18139391 Arabidopsis thaliana
AT3G48920 1.0kb downstream 1.0kb downstream 2170 true Chr3: 18139392-18141561 Arabidopsis thaliana
AT3G48920 1.0kb downstream 1.0kb downstream 1000 false Chr3: 18140562-18141561 Arabidopsis thaliana
AT3G48920 2.0kb upstream 2.0kb upstream 3170 true Chr3: 18137392-18140561 Arabidopsis thaliana
AT3G48920 2.0kb upstream 2.0kb upstream 2000 false Chr3: 18137392-18139391 Arabidopsis thaliana
AT3G48920 2.0kb downstream 2.0kb downstream 3170 true Chr3: 18139392-18142561 Arabidopsis thaliana
AT3G48920 2.0kb downstream 2.0kb downstream 2000 false Chr3: 18140562-18142561 Arabidopsis thaliana
AT3G48920 5.0kb upstream 5.0kb upstream 6170 true Chr3: 18134392-18140561 Arabidopsis thaliana
AT3G48920 5.0kb upstream 5.0kb upstream 5000 false Chr3: 18134392-18139391 Arabidopsis thaliana
AT3G48920 5.0kb downstream 5.0kb downstream 6170 true Chr3: 18139392-18145561 Arabidopsis thaliana
AT3G48920 5.0kb downstream 5.0kb downstream 5000 false Chr3: 18140562-18145561 Arabidopsis thaliana
AT3G48920 10.0kb upstream 10.0kb upstream 11170 true Chr3: 18129392-18140561 Arabidopsis thaliana
AT3G48920 10.0kb upstream 10.0kb upstream 10000 false Chr3: 18129392-18139391 Arabidopsis thaliana
AT3G48920 10.0kb downstream 10.0kb downstream 11170 true Chr3: 18139392-18150561 Arabidopsis thaliana
AT3G48920 10.0kb downstream 10.0kb downstream 10000 false Chr3: 18140562-18150561 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361383 5261 Brassicaceae View MSA
123839263 5264 Brassicales-Malvales View MSA
124342600 5266 SBM View MSA
124244304 5268 Malvidae View MSA
124067313 5270 Rosid View MSA
123750706 5271 Pentapetalae View MSA
122786386 5272 Eudicot View MSA
122049039 5273 Angiosperm View MSA
121311219 5274 Embryophyte View MSA
123348543 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.096     Low  
cufflinks 1.164        
cufflinks 0.059     Low  
cufflinks 3.858       High
cufflinks 0.237     Low  
cufflinks 0.107     Low  

0 Strain