Gene : AT3G18295 A. thaliana TAIR10
Defline:  (1 of 9) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Genomic Order:  1892
Name:  ? AT3G18295 Secondary Identifier:  ? PAC:19664083
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G18295 0.5kb upstream 0.5kb upstream 1603 true Chr3: 6280704-6282306 Arabidopsis thaliana
AT3G18295 0.5kb upstream 0.5kb upstream 500 false Chr3: 6280704-6281203 Arabidopsis thaliana
AT3G18295 0.5kb downstream 0.5kb downstream 1603 true Chr3: 6281204-6282806 Arabidopsis thaliana
AT3G18295 0.5kb downstream 0.5kb downstream 500 false Chr3: 6282307-6282806 Arabidopsis thaliana
AT3G18295 1.0kb upstream 1.0kb upstream 2103 true Chr3: 6280204-6282306 Arabidopsis thaliana
AT3G18295 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6280204-6281203 Arabidopsis thaliana
AT3G18295 1.0kb downstream 1.0kb downstream 2103 true Chr3: 6281204-6283306 Arabidopsis thaliana
AT3G18295 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6282307-6283306 Arabidopsis thaliana
AT3G18295 2.0kb upstream 2.0kb upstream 3103 true Chr3: 6279204-6282306 Arabidopsis thaliana
AT3G18295 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6279204-6281203 Arabidopsis thaliana
AT3G18295 2.0kb downstream 2.0kb downstream 3103 true Chr3: 6281204-6284306 Arabidopsis thaliana
AT3G18295 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6282307-6284306 Arabidopsis thaliana
AT3G18295 5.0kb upstream 5.0kb upstream 6103 true Chr3: 6276204-6282306 Arabidopsis thaliana
AT3G18295 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6276204-6281203 Arabidopsis thaliana
AT3G18295 5.0kb downstream 5.0kb downstream 6103 true Chr3: 6281204-6287306 Arabidopsis thaliana
AT3G18295 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6282307-6287306 Arabidopsis thaliana
AT3G18295 10.0kb upstream 10.0kb upstream 11103 true Chr3: 6271204-6282306 Arabidopsis thaliana
AT3G18295 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6271204-6281203 Arabidopsis thaliana
AT3G18295 10.0kb downstream 10.0kb downstream 11103 true Chr3: 6281204-6292306 Arabidopsis thaliana
AT3G18295 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6282307-6292306 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380856 5261 Brassicaceae View MSA
123802936 5264 Brassicales-Malvales View MSA
124300086 5266 SBM View MSA
124253644 5268 Malvidae View MSA
124073267 5270 Rosid View MSA
123753733 5271 Pentapetalae View MSA
122792020 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.303       Low
cufflinks 10.422       High
cufflinks 7.722        
cufflinks 8.925        
cufflinks 7.614        
cufflinks 10.488       High

0 Strain