Gene : PYD1 A. thaliana TAIR10
Primary Identifier:  ? AT3G17810 Defline:  (1 of 1) 1.3.1.2 - Dihydropyrimidine dehydrogenase (NADP(+)) / Dihydrouracil dehydrogenase (NADP+)
Genomic Order:  1838 Name:  ? AT3G17810
Secondary Identifier:  ? PAC:19663896
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3982 Arabidopsis thaliana pathologic  
Athaliana PWY-6430 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G17810 0.5kb upstream 0.5kb upstream 2969 true Chr3: 6093598-6096566 Arabidopsis thaliana
AT3G17810 0.5kb upstream 0.5kb upstream 500 false Chr3: 6093598-6094097 Arabidopsis thaliana
AT3G17810 0.5kb downstream 0.5kb downstream 2969 true Chr3: 6094098-6097066 Arabidopsis thaliana
AT3G17810 0.5kb downstream 0.5kb downstream 500 false Chr3: 6096567-6097066 Arabidopsis thaliana
AT3G17810 1.0kb upstream 1.0kb upstream 3469 true Chr3: 6093098-6096566 Arabidopsis thaliana
AT3G17810 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6093098-6094097 Arabidopsis thaliana
AT3G17810 1.0kb downstream 1.0kb downstream 3469 true Chr3: 6094098-6097566 Arabidopsis thaliana
AT3G17810 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6096567-6097566 Arabidopsis thaliana
AT3G17810 2.0kb upstream 2.0kb upstream 4469 true Chr3: 6092098-6096566 Arabidopsis thaliana
AT3G17810 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6092098-6094097 Arabidopsis thaliana
AT3G17810 2.0kb downstream 2.0kb downstream 4469 true Chr3: 6094098-6098566 Arabidopsis thaliana
AT3G17810 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6096567-6098566 Arabidopsis thaliana
AT3G17810 5.0kb upstream 5.0kb upstream 7469 true Chr3: 6089098-6096566 Arabidopsis thaliana
AT3G17810 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6089098-6094097 Arabidopsis thaliana
AT3G17810 5.0kb downstream 5.0kb downstream 7469 true Chr3: 6094098-6101566 Arabidopsis thaliana
AT3G17810 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6096567-6101566 Arabidopsis thaliana
AT3G17810 10.0kb upstream 10.0kb upstream 12469 true Chr3: 6084098-6096566 Arabidopsis thaliana
AT3G17810 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6084098-6094097 Arabidopsis thaliana
AT3G17810 10.0kb downstream 10.0kb downstream 12469 true Chr3: 6094098-6106566 Arabidopsis thaliana
AT3G17810 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6096567-6106566 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371737 5261 Brassicaceae View MSA
123830311 5264 Brassicales-Malvales View MSA
124341977 5266 SBM View MSA
124249646 5268 Malvidae View MSA
124064104 5270 Rosid View MSA
123744915 5271 Pentapetalae View MSA
122792180 5272 Eudicot View MSA
122047795 5273 Angiosperm View MSA
121344845 5274 Embryophyte View MSA
123423995 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 25.059       Low
cufflinks 38.52     High  
cufflinks 28.844     High  
cufflinks 44.087     High  
cufflinks 45.881     High High
cufflinks 35.321     High  

0 Strain