Gene : AT3G18050 A. thaliana TAIR10
Defline:  (1 of 1) PTHR34056:SF1 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MRC8 Genomic Order:  1862
Name:  ? AT3G18050 Secondary Identifier:  ? PAC:19659723
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G18050 0.5kb upstream 0.5kb upstream 2496 true Chr3: 6180359-6182854 Arabidopsis thaliana
AT3G18050 0.5kb upstream 0.5kb upstream 500 false Chr3: 6180359-6180858 Arabidopsis thaliana
AT3G18050 0.5kb downstream 0.5kb downstream 2496 true Chr3: 6180859-6183354 Arabidopsis thaliana
AT3G18050 0.5kb downstream 0.5kb downstream 500 false Chr3: 6182855-6183354 Arabidopsis thaliana
AT3G18050 1.0kb upstream 1.0kb upstream 2996 true Chr3: 6179859-6182854 Arabidopsis thaliana
AT3G18050 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6179859-6180858 Arabidopsis thaliana
AT3G18050 1.0kb downstream 1.0kb downstream 2996 true Chr3: 6180859-6183854 Arabidopsis thaliana
AT3G18050 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6182855-6183854 Arabidopsis thaliana
AT3G18050 2.0kb upstream 2.0kb upstream 3996 true Chr3: 6178859-6182854 Arabidopsis thaliana
AT3G18050 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6178859-6180858 Arabidopsis thaliana
AT3G18050 2.0kb downstream 2.0kb downstream 3996 true Chr3: 6180859-6184854 Arabidopsis thaliana
AT3G18050 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6182855-6184854 Arabidopsis thaliana
AT3G18050 5.0kb upstream 5.0kb upstream 6996 true Chr3: 6175859-6182854 Arabidopsis thaliana
AT3G18050 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6175859-6180858 Arabidopsis thaliana
AT3G18050 5.0kb downstream 5.0kb downstream 6996 true Chr3: 6180859-6187854 Arabidopsis thaliana
AT3G18050 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6182855-6187854 Arabidopsis thaliana
AT3G18050 10.0kb upstream 10.0kb upstream 11996 true Chr3: 6170859-6182854 Arabidopsis thaliana
AT3G18050 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6170859-6180858 Arabidopsis thaliana
AT3G18050 10.0kb downstream 10.0kb downstream 11996 true Chr3: 6180859-6192854 Arabidopsis thaliana
AT3G18050 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6182855-6192854 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362095 5261 Brassicaceae View MSA
123840241 5264 Brassicales-Malvales View MSA
124342809 5266 SBM View MSA
124243623 5268 Malvidae View MSA
124067453 5270 Rosid View MSA
123740304 5271 Pentapetalae View MSA
122789532 5272 Eudicot View MSA
122043438 5273 Angiosperm View MSA
121310125 5274 Embryophyte View MSA
123347699 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.245     High High
cufflinks 3.689        
cufflinks 44.257     High  
cufflinks 3.908        
cufflinks 32.742     High  
cufflinks 3.983        

0 Strain