Gene : EBP A. thaliana TAIR10
Primary Identifier:  ? AT3G16770 Defline:  (1 of 30) K09286 - EREBP-like factor (EREBP)
Genomic Order:  1723 Name:  ? AT3G16770
Secondary Identifier:  ? PAC:19664048
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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16770 0.5kb upstream 0.5kb upstream 1862 true Chr3: 5705162-5707023 Arabidopsis thaliana
AT3G16770 0.5kb upstream 0.5kb upstream 500 false Chr3: 5705162-5705661 Arabidopsis thaliana
AT3G16770 0.5kb downstream 0.5kb downstream 1862 true Chr3: 5705662-5707523 Arabidopsis thaliana
AT3G16770 0.5kb downstream 0.5kb downstream 500 false Chr3: 5707024-5707523 Arabidopsis thaliana
AT3G16770 1.0kb upstream 1.0kb upstream 2362 true Chr3: 5704662-5707023 Arabidopsis thaliana
AT3G16770 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5704662-5705661 Arabidopsis thaliana
AT3G16770 1.0kb downstream 1.0kb downstream 2362 true Chr3: 5705662-5708023 Arabidopsis thaliana
AT3G16770 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5707024-5708023 Arabidopsis thaliana
AT3G16770 2.0kb upstream 2.0kb upstream 3362 true Chr3: 5703662-5707023 Arabidopsis thaliana
AT3G16770 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5703662-5705661 Arabidopsis thaliana
AT3G16770 2.0kb downstream 2.0kb downstream 3362 true Chr3: 5705662-5709023 Arabidopsis thaliana
AT3G16770 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5707024-5709023 Arabidopsis thaliana
AT3G16770 5.0kb upstream 5.0kb upstream 6362 true Chr3: 5700662-5707023 Arabidopsis thaliana
AT3G16770 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5700662-5705661 Arabidopsis thaliana
AT3G16770 5.0kb downstream 5.0kb downstream 6362 true Chr3: 5705662-5712023 Arabidopsis thaliana
AT3G16770 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5707024-5712023 Arabidopsis thaliana
AT3G16770 10.0kb upstream 10.0kb upstream 11362 true Chr3: 5695662-5707023 Arabidopsis thaliana
AT3G16770 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5695662-5705661 Arabidopsis thaliana
AT3G16770 10.0kb downstream 10.0kb downstream 11362 true Chr3: 5705662-5717023 Arabidopsis thaliana
AT3G16770 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5707024-5717023 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377729 5261 Brassicaceae View MSA
123839333 5264 Brassicales-Malvales View MSA
124338239 5266 SBM View MSA
124245047 5268 Malvidae View MSA
124065952 5270 Rosid View MSA
123736884 5271 Pentapetalae View MSA
122769881 5272 Eudicot View MSA
122050930 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 87.971     High Low
cufflinks 225.875     High  
cufflinks 204.262     High  
cufflinks 263.114     High High
cufflinks 196.405     High  
cufflinks 150.901     High  

0 Strain