Gene : UGT88A1 A. thaliana TAIR10
Primary Identifier:  ? AT3G16520 Defline:  (1 of 1) PTHR11926//PTHR11926:SF343 - GLUCOSYL/GLUCURONOSYL TRANSFERASES // UDP-GLYCOSYLTRANSFERASE 88A1
Genomic Order:  1695 Name:  ? AT3G16520
Secondary Identifier:  ? PAC:19663104
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16520 0.5kb upstream 0.5kb upstream 2934 true Chr3: 5618440-5621373 Arabidopsis thaliana
AT3G16520 0.5kb upstream 0.5kb upstream 500 false Chr3: 5620874-5621373 Arabidopsis thaliana
AT3G16520 0.5kb downstream 0.5kb downstream 2934 true Chr3: 5617940-5620873 Arabidopsis thaliana
AT3G16520 0.5kb downstream 0.5kb downstream 500 false Chr3: 5617940-5618439 Arabidopsis thaliana
AT3G16520 1.0kb upstream 1.0kb upstream 3434 true Chr3: 5618440-5621873 Arabidopsis thaliana
AT3G16520 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5620874-5621873 Arabidopsis thaliana
AT3G16520 1.0kb downstream 1.0kb downstream 3434 true Chr3: 5617440-5620873 Arabidopsis thaliana
AT3G16520 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5617440-5618439 Arabidopsis thaliana
AT3G16520 2.0kb upstream 2.0kb upstream 4434 true Chr3: 5618440-5622873 Arabidopsis thaliana
AT3G16520 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5620874-5622873 Arabidopsis thaliana
AT3G16520 2.0kb downstream 2.0kb downstream 4434 true Chr3: 5616440-5620873 Arabidopsis thaliana
AT3G16520 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5616440-5618439 Arabidopsis thaliana
AT3G16520 5.0kb upstream 5.0kb upstream 7434 true Chr3: 5618440-5625873 Arabidopsis thaliana
AT3G16520 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5620874-5625873 Arabidopsis thaliana
AT3G16520 5.0kb downstream 5.0kb downstream 7434 true Chr3: 5613440-5620873 Arabidopsis thaliana
AT3G16520 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5613440-5618439 Arabidopsis thaliana
AT3G16520 10.0kb upstream 10.0kb upstream 12434 true Chr3: 5618440-5630873 Arabidopsis thaliana
AT3G16520 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5620874-5630873 Arabidopsis thaliana
AT3G16520 10.0kb downstream 10.0kb downstream 12434 true Chr3: 5608440-5620873 Arabidopsis thaliana
AT3G16520 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5608440-5618439 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377499 5261 Brassicaceae View MSA
123837848 5264 Brassicales-Malvales View MSA
124349133 5266 SBM View MSA
124247123 5268 Malvidae View MSA
124074547 5270 Rosid View MSA
123753607 5271 Pentapetalae View MSA
122797779 5272 Eudicot View MSA
122051696 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.727        
cufflinks 6.548        
cufflinks 19.028        
cufflinks 7.207        
cufflinks 26.846     High High
cufflinks 4.507       Low

0 Strain