Gene : MPPalpha A. thaliana TAIR10
Primary Identifier:  ? AT3G16480 Defline:  (1 of 2) K01412 - mitochondrial-processing peptidase subunit alpha [EC:3.4.24.64] (PMPCA, MAS2)
Genomic Order:  1691 Name:  ? AT3G16480
Secondary Identifier:  ? PAC:19664666
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Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-3781 Arabidopsis thaliana pathologic  
Athaliana PWY-7279 Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16480 0.5kb upstream 0.5kb upstream 3709 true Chr3: 5599278-5602986 Arabidopsis thaliana
AT3G16480 0.5kb upstream 0.5kb upstream 500 false Chr3: 5599278-5599777 Arabidopsis thaliana
AT3G16480 0.5kb downstream 0.5kb downstream 3709 true Chr3: 5599778-5603486 Arabidopsis thaliana
AT3G16480 0.5kb downstream 0.5kb downstream 500 false Chr3: 5602987-5603486 Arabidopsis thaliana
AT3G16480 1.0kb upstream 1.0kb upstream 4209 true Chr3: 5598778-5602986 Arabidopsis thaliana
AT3G16480 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5598778-5599777 Arabidopsis thaliana
AT3G16480 1.0kb downstream 1.0kb downstream 4209 true Chr3: 5599778-5603986 Arabidopsis thaliana
AT3G16480 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5602987-5603986 Arabidopsis thaliana
AT3G16480 2.0kb upstream 2.0kb upstream 5209 true Chr3: 5597778-5602986 Arabidopsis thaliana
AT3G16480 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5597778-5599777 Arabidopsis thaliana
AT3G16480 2.0kb downstream 2.0kb downstream 5209 true Chr3: 5599778-5604986 Arabidopsis thaliana
AT3G16480 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5602987-5604986 Arabidopsis thaliana
AT3G16480 5.0kb upstream 5.0kb upstream 8209 true Chr3: 5594778-5602986 Arabidopsis thaliana
AT3G16480 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5594778-5599777 Arabidopsis thaliana
AT3G16480 5.0kb downstream 5.0kb downstream 8209 true Chr3: 5599778-5607986 Arabidopsis thaliana
AT3G16480 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5602987-5607986 Arabidopsis thaliana
AT3G16480 10.0kb upstream 10.0kb upstream 13209 true Chr3: 5589778-5602986 Arabidopsis thaliana
AT3G16480 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5589778-5599777 Arabidopsis thaliana
AT3G16480 10.0kb downstream 10.0kb downstream 13209 true Chr3: 5599778-5612986 Arabidopsis thaliana
AT3G16480 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5602987-5612986 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041394 5273 Angiosperm View MSA
122375459 5261 Brassicaceae View MSA
123837486 5264 Brassicales-Malvales View MSA
124346987 5266 SBM View MSA
124244870 5268 Malvidae View MSA
124064083 5270 Rosid View MSA
123738249 5271 Pentapetalae View MSA
122789346 5272 Eudicot View MSA
121350423 5274 Embryophyte View MSA
123425006 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.627        
cufflinks 14.466        
cufflinks 13.711        
cufflinks 16.091        
cufflinks 13.598       Low
cufflinks 16.779       High

0 Strain