Gene : FAD5 A. thaliana TAIR10
Primary Identifier:  ? AT3G15850 Defline:  (1 of 5) K00507 - stearoyl-CoA desaturase (delta-9 desaturase) (SCD, desC)
Genomic Order:  1624 Name:  ? AT3G15850
Secondary Identifier:  ? PAC:19663008
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Genomics

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Expression

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4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15850 0.5kb upstream 0.5kb upstream 2677 true Chr3: 5358509-5361185 Arabidopsis thaliana
AT3G15850 0.5kb upstream 0.5kb upstream 500 false Chr3: 5358509-5359008 Arabidopsis thaliana
AT3G15850 0.5kb downstream 0.5kb downstream 2677 true Chr3: 5359009-5361685 Arabidopsis thaliana
AT3G15850 0.5kb downstream 0.5kb downstream 500 false Chr3: 5361186-5361685 Arabidopsis thaliana
AT3G15850 1.0kb upstream 1.0kb upstream 3177 true Chr3: 5358009-5361185 Arabidopsis thaliana
AT3G15850 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5358009-5359008 Arabidopsis thaliana
AT3G15850 1.0kb downstream 1.0kb downstream 3177 true Chr3: 5359009-5362185 Arabidopsis thaliana
AT3G15850 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5361186-5362185 Arabidopsis thaliana
AT3G15850 2.0kb upstream 2.0kb upstream 4177 true Chr3: 5357009-5361185 Arabidopsis thaliana
AT3G15850 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5357009-5359008 Arabidopsis thaliana
AT3G15850 2.0kb downstream 2.0kb downstream 4177 true Chr3: 5359009-5363185 Arabidopsis thaliana
AT3G15850 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5361186-5363185 Arabidopsis thaliana
AT3G15850 5.0kb upstream 5.0kb upstream 7177 true Chr3: 5354009-5361185 Arabidopsis thaliana
AT3G15850 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5354009-5359008 Arabidopsis thaliana
AT3G15850 5.0kb downstream 5.0kb downstream 7177 true Chr3: 5359009-5366185 Arabidopsis thaliana
AT3G15850 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5361186-5366185 Arabidopsis thaliana
AT3G15850 10.0kb upstream 10.0kb upstream 12177 true Chr3: 5349009-5361185 Arabidopsis thaliana
AT3G15850 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5349009-5359008 Arabidopsis thaliana
AT3G15850 10.0kb downstream 10.0kb downstream 12177 true Chr3: 5359009-5371185 Arabidopsis thaliana
AT3G15850 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5361186-5371185 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791758 5273 Angiosperm View MSA
122377660 5261 Brassicaceae View MSA
123833249 5264 Brassicales-Malvales View MSA
124336851 5266 SBM View MSA
124241251 5268 Malvidae View MSA
124066051 5270 Rosid View MSA
123737044 5271 Pentapetalae View MSA
122790041 5272 Eudicot View MSA
121347067 5274 Embryophyte View MSA
123427701 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 57.936     High High
cufflinks 12.964        
cufflinks 53.855     High High
cufflinks 10.369        
cufflinks 35.769     High  
cufflinks 10.474        

0 Strain