Gene : AT3G16175 A. thaliana TAIR10
Defline:  (1 of 7) 3.1.2.20 - Acyl-CoA hydrolase Genomic Order:  1659
Name:  ? AT3G16175 Secondary Identifier:  ? PAC:19663519
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-1121 Arabidopsis thaliana pathologic  
Athaliana PWY-321 Arabidopsis thaliana pathologic  
Athaliana PWY-5148 Arabidopsis thaliana pathologic  
Athaliana PWY-6733 Arabidopsis thaliana pathologic  
Athaliana PWY-735 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G16175 0.5kb upstream 0.5kb upstream 1416 true Chr3: 5479964-5481379 Arabidopsis thaliana
AT3G16175 0.5kb upstream 0.5kb upstream 500 false Chr3: 5479964-5480463 Arabidopsis thaliana
AT3G16175 0.5kb downstream 0.5kb downstream 1416 true Chr3: 5480464-5481879 Arabidopsis thaliana
AT3G16175 0.5kb downstream 0.5kb downstream 500 false Chr3: 5481380-5481879 Arabidopsis thaliana
AT3G16175 1.0kb upstream 1.0kb upstream 1916 true Chr3: 5479464-5481379 Arabidopsis thaliana
AT3G16175 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5479464-5480463 Arabidopsis thaliana
AT3G16175 1.0kb downstream 1.0kb downstream 1916 true Chr3: 5480464-5482379 Arabidopsis thaliana
AT3G16175 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5481380-5482379 Arabidopsis thaliana
AT3G16175 2.0kb upstream 2.0kb upstream 2916 true Chr3: 5478464-5481379 Arabidopsis thaliana
AT3G16175 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5478464-5480463 Arabidopsis thaliana
AT3G16175 2.0kb downstream 2.0kb downstream 2916 true Chr3: 5480464-5483379 Arabidopsis thaliana
AT3G16175 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5481380-5483379 Arabidopsis thaliana
AT3G16175 5.0kb upstream 5.0kb upstream 5916 true Chr3: 5475464-5481379 Arabidopsis thaliana
AT3G16175 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5475464-5480463 Arabidopsis thaliana
AT3G16175 5.0kb downstream 5.0kb downstream 5916 true Chr3: 5480464-5486379 Arabidopsis thaliana
AT3G16175 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5481380-5486379 Arabidopsis thaliana
AT3G16175 10.0kb upstream 10.0kb upstream 10916 true Chr3: 5470464-5481379 Arabidopsis thaliana
AT3G16175 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5470464-5480463 Arabidopsis thaliana
AT3G16175 10.0kb downstream 10.0kb downstream 10916 true Chr3: 5480464-5491379 Arabidopsis thaliana
AT3G16175 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5481380-5491379 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377845 5261 Brassicaceae View MSA
123840254 5264 Brassicales-Malvales View MSA
124336477 5266 SBM View MSA
124252393 5268 Malvidae View MSA
124050291 5270 Rosid View MSA
123743856 5271 Pentapetalae View MSA
122790671 5272 Eudicot View MSA
122049219 5273 Angiosperm View MSA
121311303 5274 Embryophyte View MSA
123428627 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.368        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.706        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.626        
cufflinks 0.019     Low Low

0 Strain