Gene : AT3G15520 A. thaliana TAIR10
Defline:  (1 of 1) PTHR11071//PTHR11071:SF174 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE // PEPTIDYL-PROLYL CIS-TRANS ISOMERASE CYP37, CHLOROPLASTIC Genomic Order:  1588
Name:  ? AT3G15520 Secondary Identifier:  ? PAC:19661662
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15520 0.5kb upstream 0.5kb upstream 3408 true Chr3: 5249599-5253006 Arabidopsis thaliana
AT3G15520 0.5kb upstream 0.5kb upstream 500 false Chr3: 5252507-5253006 Arabidopsis thaliana
AT3G15520 0.5kb downstream 0.5kb downstream 3408 true Chr3: 5249099-5252506 Arabidopsis thaliana
AT3G15520 0.5kb downstream 0.5kb downstream 500 false Chr3: 5249099-5249598 Arabidopsis thaliana
AT3G15520 1.0kb upstream 1.0kb upstream 3908 true Chr3: 5249599-5253506 Arabidopsis thaliana
AT3G15520 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5252507-5253506 Arabidopsis thaliana
AT3G15520 1.0kb downstream 1.0kb downstream 3908 true Chr3: 5248599-5252506 Arabidopsis thaliana
AT3G15520 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5248599-5249598 Arabidopsis thaliana
AT3G15520 2.0kb upstream 2.0kb upstream 4908 true Chr3: 5249599-5254506 Arabidopsis thaliana
AT3G15520 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5252507-5254506 Arabidopsis thaliana
AT3G15520 2.0kb downstream 2.0kb downstream 4908 true Chr3: 5247599-5252506 Arabidopsis thaliana
AT3G15520 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5247599-5249598 Arabidopsis thaliana
AT3G15520 5.0kb upstream 5.0kb upstream 7908 true Chr3: 5249599-5257506 Arabidopsis thaliana
AT3G15520 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5252507-5257506 Arabidopsis thaliana
AT3G15520 5.0kb downstream 5.0kb downstream 7908 true Chr3: 5244599-5252506 Arabidopsis thaliana
AT3G15520 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5244599-5249598 Arabidopsis thaliana
AT3G15520 10.0kb upstream 10.0kb upstream 12908 true Chr3: 5249599-5262506 Arabidopsis thaliana
AT3G15520 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5252507-5262506 Arabidopsis thaliana
AT3G15520 10.0kb downstream 10.0kb downstream 12908 true Chr3: 5239599-5252506 Arabidopsis thaliana
AT3G15520 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5239599-5249598 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377276 5261 Brassicaceae View MSA
123827382 5264 Brassicales-Malvales View MSA
124341113 5266 SBM View MSA
124241446 5268 Malvidae View MSA
124050364 5270 Rosid View MSA
123743809 5271 Pentapetalae View MSA
122791846 5272 Eudicot View MSA
122046545 5273 Angiosperm View MSA
121347245 5274 Embryophyte View MSA
123428005 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.294        
cufflinks 3.428        
cufflinks 31.273     High High
cufflinks 2.919        
cufflinks 20.621        
cufflinks 1.941       Low

0 Strain