Gene : HPY2 A. thaliana TAIR10
Primary Identifier:  ? AT3G15150 Defline:  (1 of 1) PTHR21330:SF2 - E3 SUMO-PROTEIN LIGASE MMS21
Genomic Order:  1543 Name:  ? AT3G15150
Secondary Identifier:  ? PAC:19661710
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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G15150 0.5kb upstream 0.5kb upstream 2656 true Chr3: 5101985-5104640 Arabidopsis thaliana
AT3G15150 0.5kb upstream 0.5kb upstream 500 false Chr3: 5104141-5104640 Arabidopsis thaliana
AT3G15150 0.5kb downstream 0.5kb downstream 2656 true Chr3: 5101485-5104140 Arabidopsis thaliana
AT3G15150 0.5kb downstream 0.5kb downstream 500 false Chr3: 5101485-5101984 Arabidopsis thaliana
AT3G15150 1.0kb upstream 1.0kb upstream 3156 true Chr3: 5101985-5105140 Arabidopsis thaliana
AT3G15150 1.0kb upstream 1.0kb upstream 1000 false Chr3: 5104141-5105140 Arabidopsis thaliana
AT3G15150 1.0kb downstream 1.0kb downstream 3156 true Chr3: 5100985-5104140 Arabidopsis thaliana
AT3G15150 1.0kb downstream 1.0kb downstream 1000 false Chr3: 5100985-5101984 Arabidopsis thaliana
AT3G15150 2.0kb upstream 2.0kb upstream 4156 true Chr3: 5101985-5106140 Arabidopsis thaliana
AT3G15150 2.0kb upstream 2.0kb upstream 2000 false Chr3: 5104141-5106140 Arabidopsis thaliana
AT3G15150 2.0kb downstream 2.0kb downstream 4156 true Chr3: 5099985-5104140 Arabidopsis thaliana
AT3G15150 2.0kb downstream 2.0kb downstream 2000 false Chr3: 5099985-5101984 Arabidopsis thaliana
AT3G15150 5.0kb upstream 5.0kb upstream 7156 true Chr3: 5101985-5109140 Arabidopsis thaliana
AT3G15150 5.0kb upstream 5.0kb upstream 5000 false Chr3: 5104141-5109140 Arabidopsis thaliana
AT3G15150 5.0kb downstream 5.0kb downstream 7156 true Chr3: 5096985-5104140 Arabidopsis thaliana
AT3G15150 5.0kb downstream 5.0kb downstream 5000 false Chr3: 5096985-5101984 Arabidopsis thaliana
AT3G15150 10.0kb upstream 10.0kb upstream 12156 true Chr3: 5101985-5114140 Arabidopsis thaliana
AT3G15150 10.0kb upstream 10.0kb upstream 10000 false Chr3: 5104141-5114140 Arabidopsis thaliana
AT3G15150 10.0kb downstream 10.0kb downstream 12156 true Chr3: 5091985-5104140 Arabidopsis thaliana
AT3G15150 10.0kb downstream 10.0kb downstream 10000 false Chr3: 5091985-5101984 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373587 5261 Brassicaceae View MSA
123828349 5264 Brassicales-Malvales View MSA
124340974 5266 SBM View MSA
124238687 5268 Malvidae View MSA
124064105 5270 Rosid View MSA
123740450 5271 Pentapetalae View MSA
122790710 5272 Eudicot View MSA
122044966 5273 Angiosperm View MSA
121344157 5274 Embryophyte View MSA
123424394 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.261        
cufflinks 2.511        
cufflinks 0.959       Low
cufflinks 2.698       High
cufflinks 1.048        
cufflinks 2.037        

0 Strain