Gene : AT3G14180 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31307//PTHR31307:SF4 - FAMILY NOT NAMED // 6B-INTERACTING PROTEIN 1-LIKE 1-RELATED Genomic Order:  1437
Name:  ? AT3G14180 Secondary Identifier:  ? PAC:19664352
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G14180 0.5kb upstream 0.5kb upstream 2236 true Chr3: 4707113-4709348 Arabidopsis thaliana
AT3G14180 0.5kb upstream 0.5kb upstream 500 false Chr3: 4708849-4709348 Arabidopsis thaliana
AT3G14180 0.5kb downstream 0.5kb downstream 2236 true Chr3: 4706613-4708848 Arabidopsis thaliana
AT3G14180 0.5kb downstream 0.5kb downstream 500 false Chr3: 4706613-4707112 Arabidopsis thaliana
AT3G14180 1.0kb upstream 1.0kb upstream 2736 true Chr3: 4707113-4709848 Arabidopsis thaliana
AT3G14180 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4708849-4709848 Arabidopsis thaliana
AT3G14180 1.0kb downstream 1.0kb downstream 2736 true Chr3: 4706113-4708848 Arabidopsis thaliana
AT3G14180 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4706113-4707112 Arabidopsis thaliana
AT3G14180 2.0kb upstream 2.0kb upstream 3736 true Chr3: 4707113-4710848 Arabidopsis thaliana
AT3G14180 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4708849-4710848 Arabidopsis thaliana
AT3G14180 2.0kb downstream 2.0kb downstream 3736 true Chr3: 4705113-4708848 Arabidopsis thaliana
AT3G14180 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4705113-4707112 Arabidopsis thaliana
AT3G14180 5.0kb upstream 5.0kb upstream 6736 true Chr3: 4707113-4713848 Arabidopsis thaliana
AT3G14180 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4708849-4713848 Arabidopsis thaliana
AT3G14180 5.0kb downstream 5.0kb downstream 6736 true Chr3: 4702113-4708848 Arabidopsis thaliana
AT3G14180 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4702113-4707112 Arabidopsis thaliana
AT3G14180 10.0kb upstream 10.0kb upstream 11736 true Chr3: 4707113-4718848 Arabidopsis thaliana
AT3G14180 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4708849-4718848 Arabidopsis thaliana
AT3G14180 10.0kb downstream 10.0kb downstream 11736 true Chr3: 4697113-4708848 Arabidopsis thaliana
AT3G14180 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4697113-4707112 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375463 5261 Brassicaceae View MSA
123800959 5264 Brassicales-Malvales View MSA
124298311 5266 SBM View MSA
124244795 5268 Malvidae View MSA
124067837 5270 Rosid View MSA
123743560 5271 Pentapetalae View MSA
122785837 5272 Eudicot View MSA
122048204 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.672        
cufflinks 30.024     High  
cufflinks 16.936       Low
cufflinks 32.693     High High
cufflinks 18.871        
cufflinks 24.684        

0 Strain