Gene : AT3G13600 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31250:SF4 - CALMODULIN-BINDING FAMILY PROTEIN-RELATED Genomic Order:  1363
Name:  ? AT3G13600 Secondary Identifier:  ? PAC:19659092
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G13600 0.5kb upstream 0.5kb upstream 2782 true Chr3: 4444602-4447383 Arabidopsis thaliana
AT3G13600 0.5kb upstream 0.5kb upstream 500 false Chr3: 4444602-4445101 Arabidopsis thaliana
AT3G13600 0.5kb downstream 0.5kb downstream 2782 true Chr3: 4445102-4447883 Arabidopsis thaliana
AT3G13600 0.5kb downstream 0.5kb downstream 500 false Chr3: 4447384-4447883 Arabidopsis thaliana
AT3G13600 1.0kb upstream 1.0kb upstream 3282 true Chr3: 4444102-4447383 Arabidopsis thaliana
AT3G13600 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4444102-4445101 Arabidopsis thaliana
AT3G13600 1.0kb downstream 1.0kb downstream 3282 true Chr3: 4445102-4448383 Arabidopsis thaliana
AT3G13600 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4447384-4448383 Arabidopsis thaliana
AT3G13600 2.0kb upstream 2.0kb upstream 4282 true Chr3: 4443102-4447383 Arabidopsis thaliana
AT3G13600 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4443102-4445101 Arabidopsis thaliana
AT3G13600 2.0kb downstream 2.0kb downstream 4282 true Chr3: 4445102-4449383 Arabidopsis thaliana
AT3G13600 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4447384-4449383 Arabidopsis thaliana
AT3G13600 5.0kb upstream 5.0kb upstream 7282 true Chr3: 4440102-4447383 Arabidopsis thaliana
AT3G13600 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4440102-4445101 Arabidopsis thaliana
AT3G13600 5.0kb downstream 5.0kb downstream 7282 true Chr3: 4445102-4452383 Arabidopsis thaliana
AT3G13600 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4447384-4452383 Arabidopsis thaliana
AT3G13600 10.0kb upstream 10.0kb upstream 12282 true Chr3: 4435102-4447383 Arabidopsis thaliana
AT3G13600 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4435102-4445101 Arabidopsis thaliana
AT3G13600 10.0kb downstream 10.0kb downstream 12282 true Chr3: 4445102-4457383 Arabidopsis thaliana
AT3G13600 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4447384-4457383 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376099 5261 Brassicaceae View MSA
123828511 5264 Brassicales-Malvales View MSA
124340058 5266 SBM View MSA
124253157 5268 Malvidae View MSA
124062345 5270 Rosid View MSA
123742026 5271 Pentapetalae View MSA
122795644 5272 Eudicot View MSA
122045965 5273 Angiosperm View MSA
121351725 5274 Embryophyte View MSA
123382293 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.265        
cufflinks 4.273        
cufflinks 1.01        
cufflinks 4.182        
cufflinks 0.698       Low
cufflinks 7.305       High

0 Strain