Gene : WIP3 A. thaliana TAIR10
Primary Identifier:  ? AT3G13360 Defline:  (1 of 3) PTHR34562:SF1 - WPP DOMAIN-INTERACTING PROTEIN 2-RELATED
Genomic Order:  1331 Name:  ? AT3G13360
Secondary Identifier:  ? PAC:19662278
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G13360 0.5kb upstream 0.5kb upstream 2554 true Chr3: 4338359-4340912 Arabidopsis thaliana
AT3G13360 0.5kb upstream 0.5kb upstream 500 false Chr3: 4340413-4340912 Arabidopsis thaliana
AT3G13360 0.5kb downstream 0.5kb downstream 2554 true Chr3: 4337859-4340412 Arabidopsis thaliana
AT3G13360 0.5kb downstream 0.5kb downstream 500 false Chr3: 4337859-4338358 Arabidopsis thaliana
AT3G13360 1.0kb upstream 1.0kb upstream 3054 true Chr3: 4338359-4341412 Arabidopsis thaliana
AT3G13360 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4340413-4341412 Arabidopsis thaliana
AT3G13360 1.0kb downstream 1.0kb downstream 3054 true Chr3: 4337359-4340412 Arabidopsis thaliana
AT3G13360 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4337359-4338358 Arabidopsis thaliana
AT3G13360 2.0kb upstream 2.0kb upstream 4054 true Chr3: 4338359-4342412 Arabidopsis thaliana
AT3G13360 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4340413-4342412 Arabidopsis thaliana
AT3G13360 2.0kb downstream 2.0kb downstream 4054 true Chr3: 4336359-4340412 Arabidopsis thaliana
AT3G13360 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4336359-4338358 Arabidopsis thaliana
AT3G13360 5.0kb upstream 5.0kb upstream 7054 true Chr3: 4338359-4345412 Arabidopsis thaliana
AT3G13360 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4340413-4345412 Arabidopsis thaliana
AT3G13360 5.0kb downstream 5.0kb downstream 7054 true Chr3: 4333359-4340412 Arabidopsis thaliana
AT3G13360 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4333359-4338358 Arabidopsis thaliana
AT3G13360 10.0kb upstream 10.0kb upstream 12054 true Chr3: 4338359-4350412 Arabidopsis thaliana
AT3G13360 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4340413-4350412 Arabidopsis thaliana
AT3G13360 10.0kb downstream 10.0kb downstream 12054 true Chr3: 4328359-4340412 Arabidopsis thaliana
AT3G13360 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4328359-4338358 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367551 5261 Brassicaceae View MSA
123799385 5264 Brassicales-Malvales View MSA
124296910 5266 SBM View MSA
124148940 5268 Malvidae View MSA
123874840 5270 Rosid View MSA
123458758 5271 Pentapetalae View MSA
122494156 5272 Eudicot View MSA
122049938 5273 Angiosperm View MSA
121311655 5274 Embryophyte View MSA
123348925 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.926     High  
cufflinks 40.855     High  
cufflinks 25.595        
cufflinks 38.326     High  
cufflinks 22.521       Low
cufflinks 42.949     High High

0 Strain