Gene : SERAT2;2 A. thaliana TAIR10
Primary Identifier:  ? AT3G13110 Defline:  (1 of 2) PTHR23416//PTHR23416:SF56 - SIALIC ACID SYNTHASE-RELATED // SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC-RELATED
Genomic Order:  1299 Name:  ? AT3G13110
Secondary Identifier:  ? PAC:19662938
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana CYSTSYN-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-6936 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

6 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G13110 0.5kb upstream 0.5kb upstream 2186 true Chr3: 4214617-4216802 Arabidopsis thaliana
AT3G13110 0.5kb upstream 0.5kb upstream 500 false Chr3: 4216303-4216802 Arabidopsis thaliana
AT3G13110 0.5kb downstream 0.5kb downstream 2186 true Chr3: 4214117-4216302 Arabidopsis thaliana
AT3G13110 0.5kb downstream 0.5kb downstream 500 false Chr3: 4214117-4214616 Arabidopsis thaliana
AT3G13110 1.0kb upstream 1.0kb upstream 2686 true Chr3: 4214617-4217302 Arabidopsis thaliana
AT3G13110 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4216303-4217302 Arabidopsis thaliana
AT3G13110 1.0kb downstream 1.0kb downstream 2686 true Chr3: 4213617-4216302 Arabidopsis thaliana
AT3G13110 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4213617-4214616 Arabidopsis thaliana
AT3G13110 2.0kb upstream 2.0kb upstream 3686 true Chr3: 4214617-4218302 Arabidopsis thaliana
AT3G13110 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4216303-4218302 Arabidopsis thaliana
AT3G13110 2.0kb downstream 2.0kb downstream 3686 true Chr3: 4212617-4216302 Arabidopsis thaliana
AT3G13110 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4212617-4214616 Arabidopsis thaliana
AT3G13110 5.0kb upstream 5.0kb upstream 6686 true Chr3: 4214617-4221302 Arabidopsis thaliana
AT3G13110 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4216303-4221302 Arabidopsis thaliana
AT3G13110 5.0kb downstream 5.0kb downstream 6686 true Chr3: 4209617-4216302 Arabidopsis thaliana
AT3G13110 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4209617-4214616 Arabidopsis thaliana
AT3G13110 10.0kb upstream 10.0kb upstream 11686 true Chr3: 4214617-4226302 Arabidopsis thaliana
AT3G13110 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4216303-4226302 Arabidopsis thaliana
AT3G13110 10.0kb downstream 10.0kb downstream 11686 true Chr3: 4204617-4216302 Arabidopsis thaliana
AT3G13110 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4204617-4214616 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364131 5261 Brassicaceae View MSA
123835018 5264 Brassicales-Malvales View MSA
124338786 5266 SBM View MSA
124238162 5268 Malvidae View MSA
124069334 5270 Rosid View MSA
123751427 5271 Pentapetalae View MSA
122788280 5272 Eudicot View MSA
122045055 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 28.854     High Low
cufflinks 44.079     High  
cufflinks 43.217     High  
cufflinks 55.87     High High
cufflinks 46.372     High  
cufflinks 43.404     High  

0 Strain