Gene : AT3G12860 A. thaliana TAIR10
Defline:  (1 of 2) K14564 - nucleolar protein 56 (NOP56) Genomic Order:  1269
Name:  ? AT3G12860 Secondary Identifier:  ? PAC:19664929
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G12860 0.5kb upstream 0.5kb upstream 2852 true Chr3: 4091070-4093921 Arabidopsis thaliana
AT3G12860 0.5kb upstream 0.5kb upstream 500 false Chr3: 4091070-4091569 Arabidopsis thaliana
AT3G12860 0.5kb downstream 0.5kb downstream 2852 true Chr3: 4091570-4094421 Arabidopsis thaliana
AT3G12860 0.5kb downstream 0.5kb downstream 500 false Chr3: 4093922-4094421 Arabidopsis thaliana
AT3G12860 1.0kb upstream 1.0kb upstream 3352 true Chr3: 4090570-4093921 Arabidopsis thaliana
AT3G12860 1.0kb upstream 1.0kb upstream 1000 false Chr3: 4090570-4091569 Arabidopsis thaliana
AT3G12860 1.0kb downstream 1.0kb downstream 3352 true Chr3: 4091570-4094921 Arabidopsis thaliana
AT3G12860 1.0kb downstream 1.0kb downstream 1000 false Chr3: 4093922-4094921 Arabidopsis thaliana
AT3G12860 2.0kb upstream 2.0kb upstream 4352 true Chr3: 4089570-4093921 Arabidopsis thaliana
AT3G12860 2.0kb upstream 2.0kb upstream 2000 false Chr3: 4089570-4091569 Arabidopsis thaliana
AT3G12860 2.0kb downstream 2.0kb downstream 4352 true Chr3: 4091570-4095921 Arabidopsis thaliana
AT3G12860 2.0kb downstream 2.0kb downstream 2000 false Chr3: 4093922-4095921 Arabidopsis thaliana
AT3G12860 5.0kb upstream 5.0kb upstream 7352 true Chr3: 4086570-4093921 Arabidopsis thaliana
AT3G12860 5.0kb upstream 5.0kb upstream 5000 false Chr3: 4086570-4091569 Arabidopsis thaliana
AT3G12860 5.0kb downstream 5.0kb downstream 7352 true Chr3: 4091570-4098921 Arabidopsis thaliana
AT3G12860 5.0kb downstream 5.0kb downstream 5000 false Chr3: 4093922-4098921 Arabidopsis thaliana
AT3G12860 10.0kb upstream 10.0kb upstream 12352 true Chr3: 4081570-4093921 Arabidopsis thaliana
AT3G12860 10.0kb upstream 10.0kb upstream 10000 false Chr3: 4081570-4091569 Arabidopsis thaliana
AT3G12860 10.0kb downstream 10.0kb downstream 12352 true Chr3: 4091570-4103921 Arabidopsis thaliana
AT3G12860 10.0kb downstream 10.0kb downstream 10000 false Chr3: 4093922-4103921 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510506 5273 Angiosperm View MSA
122364777 5261 Brassicaceae View MSA
123798826 5264 Brassicales-Malvales View MSA
124296411 5266 SBM View MSA
124148573 5268 Malvidae View MSA
123874541 5270 Rosid View MSA
123458497 5271 Pentapetalae View MSA
122493902 5272 Eudicot View MSA
121349540 5274 Embryophyte View MSA
123424801 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.319        
cufflinks 3.655        
cufflinks 1.249        
cufflinks 5.021        
cufflinks 0.8       Low
cufflinks 6.261       High

0 Strain