Gene : ACT11 A. thaliana TAIR10
Primary Identifier:  ? AT3G12110 Defline:  (1 of 3) PTHR11937//PTHR11937:SF255 - ACTIN // SUBFAMILY NOT NAMED
Genomic Order:  1190 Name:  ? AT3G12110
Secondary Identifier:  ? PAC:19664696
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G12110 0.5kb upstream 0.5kb upstream 2456 true Chr3: 3857343-3859798 Arabidopsis thaliana
AT3G12110 0.5kb upstream 0.5kb upstream 500 false Chr3: 3857343-3857842 Arabidopsis thaliana
AT3G12110 0.5kb downstream 0.5kb downstream 2456 true Chr3: 3857843-3860298 Arabidopsis thaliana
AT3G12110 0.5kb downstream 0.5kb downstream 500 false Chr3: 3859799-3860298 Arabidopsis thaliana
AT3G12110 1.0kb upstream 1.0kb upstream 2956 true Chr3: 3856843-3859798 Arabidopsis thaliana
AT3G12110 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3856843-3857842 Arabidopsis thaliana
AT3G12110 1.0kb downstream 1.0kb downstream 2956 true Chr3: 3857843-3860798 Arabidopsis thaliana
AT3G12110 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3859799-3860798 Arabidopsis thaliana
AT3G12110 2.0kb upstream 2.0kb upstream 3956 true Chr3: 3855843-3859798 Arabidopsis thaliana
AT3G12110 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3855843-3857842 Arabidopsis thaliana
AT3G12110 2.0kb downstream 2.0kb downstream 3956 true Chr3: 3857843-3861798 Arabidopsis thaliana
AT3G12110 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3859799-3861798 Arabidopsis thaliana
AT3G12110 5.0kb upstream 5.0kb upstream 6956 true Chr3: 3852843-3859798 Arabidopsis thaliana
AT3G12110 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3852843-3857842 Arabidopsis thaliana
AT3G12110 5.0kb downstream 5.0kb downstream 6956 true Chr3: 3857843-3864798 Arabidopsis thaliana
AT3G12110 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3859799-3864798 Arabidopsis thaliana
AT3G12110 10.0kb upstream 10.0kb upstream 11956 true Chr3: 3847843-3859798 Arabidopsis thaliana
AT3G12110 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3847843-3857842 Arabidopsis thaliana
AT3G12110 10.0kb downstream 10.0kb downstream 11956 true Chr3: 3857843-3869798 Arabidopsis thaliana
AT3G12110 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3859799-3869798 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371816 5261 Brassicaceae View MSA
123836998 5264 Brassicales-Malvales View MSA
124351285 5266 SBM View MSA
124247835 5268 Malvidae View MSA
124074063 5270 Rosid View MSA
123752253 5271 Pentapetalae View MSA
122794505 5272 Eudicot View MSA
122049993 5273 Angiosperm View MSA
123429016 5275 Viridiplantae View MSA
121350794 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.776        
cufflinks 20.031        
cufflinks 3.625       Low
cufflinks 25.718        
cufflinks 3.199       Low
cufflinks 44.572     High High

0 Strain