Gene : TBL1 A. thaliana TAIR10
Primary Identifier:  ? AT3G12060 Defline:  (1 of 2) PTHR32285//PTHR32285:SF22 - FAMILY NOT NAMED // PROTEIN TRICHOME BIREFRINGENCE-RELATED
Genomic Order:  1185 Name:  ? AT3G12060
Secondary Identifier:  ? PAC:19659767
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G12060 0.5kb upstream 0.5kb upstream 2509 true Chr3: 3842642-3845150 Arabidopsis thaliana
AT3G12060 0.5kb upstream 0.5kb upstream 500 false Chr3: 3842642-3843141 Arabidopsis thaliana
AT3G12060 0.5kb downstream 0.5kb downstream 2509 true Chr3: 3843142-3845650 Arabidopsis thaliana
AT3G12060 0.5kb downstream 0.5kb downstream 500 false Chr3: 3845151-3845650 Arabidopsis thaliana
AT3G12060 1.0kb upstream 1.0kb upstream 3009 true Chr3: 3842142-3845150 Arabidopsis thaliana
AT3G12060 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3842142-3843141 Arabidopsis thaliana
AT3G12060 1.0kb downstream 1.0kb downstream 3009 true Chr3: 3843142-3846150 Arabidopsis thaliana
AT3G12060 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3845151-3846150 Arabidopsis thaliana
AT3G12060 2.0kb upstream 2.0kb upstream 4009 true Chr3: 3841142-3845150 Arabidopsis thaliana
AT3G12060 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3841142-3843141 Arabidopsis thaliana
AT3G12060 2.0kb downstream 2.0kb downstream 4009 true Chr3: 3843142-3847150 Arabidopsis thaliana
AT3G12060 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3845151-3847150 Arabidopsis thaliana
AT3G12060 5.0kb upstream 5.0kb upstream 7009 true Chr3: 3838142-3845150 Arabidopsis thaliana
AT3G12060 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3838142-3843141 Arabidopsis thaliana
AT3G12060 5.0kb downstream 5.0kb downstream 7009 true Chr3: 3843142-3850150 Arabidopsis thaliana
AT3G12060 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3845151-3850150 Arabidopsis thaliana
AT3G12060 10.0kb upstream 10.0kb upstream 12009 true Chr3: 3833142-3845150 Arabidopsis thaliana
AT3G12060 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3833142-3843141 Arabidopsis thaliana
AT3G12060 10.0kb downstream 10.0kb downstream 12009 true Chr3: 3843142-3855150 Arabidopsis thaliana
AT3G12060 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3845151-3855150 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371975 5261 Brassicaceae View MSA
123800271 5264 Brassicales-Malvales View MSA
124297705 5266 SBM View MSA
124149529 5268 Malvidae View MSA
124071549 5270 Rosid View MSA
123753462 5271 Pentapetalae View MSA
122797188 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.203     Low  
cufflinks 0.563       High
cufflinks 0.064     Low Low
cufflinks 0.431        
cufflinks 0.086     Low Low
cufflinks 0.414        

0 Strain