Gene : AT3G12040 A. thaliana TAIR10
Defline:  (1 of 1) K03652 - DNA-3-methyladenine glycosylase (MPG) Genomic Order:  1183
Name:  ? AT3G12040 Secondary Identifier:  ? PAC:19664981
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G12040 0.5kb upstream 0.5kb upstream 2205 true Chr3: 3835129-3837333 Arabidopsis thaliana
AT3G12040 0.5kb upstream 0.5kb upstream 500 false Chr3: 3836834-3837333 Arabidopsis thaliana
AT3G12040 0.5kb downstream 0.5kb downstream 2205 true Chr3: 3834629-3836833 Arabidopsis thaliana
AT3G12040 0.5kb downstream 0.5kb downstream 500 false Chr3: 3834629-3835128 Arabidopsis thaliana
AT3G12040 1.0kb upstream 1.0kb upstream 2705 true Chr3: 3835129-3837833 Arabidopsis thaliana
AT3G12040 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3836834-3837833 Arabidopsis thaliana
AT3G12040 1.0kb downstream 1.0kb downstream 2705 true Chr3: 3834129-3836833 Arabidopsis thaliana
AT3G12040 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3834129-3835128 Arabidopsis thaliana
AT3G12040 2.0kb upstream 2.0kb upstream 3705 true Chr3: 3835129-3838833 Arabidopsis thaliana
AT3G12040 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3836834-3838833 Arabidopsis thaliana
AT3G12040 2.0kb downstream 2.0kb downstream 3705 true Chr3: 3833129-3836833 Arabidopsis thaliana
AT3G12040 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3833129-3835128 Arabidopsis thaliana
AT3G12040 5.0kb upstream 5.0kb upstream 6705 true Chr3: 3835129-3841833 Arabidopsis thaliana
AT3G12040 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3836834-3841833 Arabidopsis thaliana
AT3G12040 5.0kb downstream 5.0kb downstream 6705 true Chr3: 3830129-3836833 Arabidopsis thaliana
AT3G12040 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3830129-3835128 Arabidopsis thaliana
AT3G12040 10.0kb upstream 10.0kb upstream 11705 true Chr3: 3835129-3846833 Arabidopsis thaliana
AT3G12040 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3836834-3846833 Arabidopsis thaliana
AT3G12040 10.0kb downstream 10.0kb downstream 11705 true Chr3: 3825129-3836833 Arabidopsis thaliana
AT3G12040 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3825129-3835128 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363127 5261 Brassicaceae View MSA
123829039 5264 Brassicales-Malvales View MSA
124344515 5266 SBM View MSA
124242548 5268 Malvidae View MSA
124071357 5270 Rosid View MSA
123741300 5271 Pentapetalae View MSA
122788938 5272 Eudicot View MSA
122044995 5273 Angiosperm View MSA
121344812 5274 Embryophyte View MSA
123380104 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.949       High
cufflinks 1.139        
cufflinks 2.851        
cufflinks 1.384        
cufflinks 3.804        
cufflinks 1.039       Low

0 Strain