Gene : AT3G11280 A. thaliana TAIR10
Defline:  (1 of 8) PTHR24078:SF261 - DNAJ (HSP40) HOMOLOG, SUBFAMILY A, MEMBER 3A Genomic Order:  1099
Name:  ? AT3G11280 Secondary Identifier:  ? PAC:19663489
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G11280 0.5kb upstream 0.5kb upstream 2093 true Chr3: 3533255-3535347 Arabidopsis thaliana
AT3G11280 0.5kb upstream 0.5kb upstream 500 false Chr3: 3534848-3535347 Arabidopsis thaliana
AT3G11280 0.5kb downstream 0.5kb downstream 2093 true Chr3: 3532755-3534847 Arabidopsis thaliana
AT3G11280 0.5kb downstream 0.5kb downstream 500 false Chr3: 3532755-3533254 Arabidopsis thaliana
AT3G11280 1.0kb upstream 1.0kb upstream 2593 true Chr3: 3533255-3535847 Arabidopsis thaliana
AT3G11280 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3534848-3535847 Arabidopsis thaliana
AT3G11280 1.0kb downstream 1.0kb downstream 2593 true Chr3: 3532255-3534847 Arabidopsis thaliana
AT3G11280 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3532255-3533254 Arabidopsis thaliana
AT3G11280 2.0kb upstream 2.0kb upstream 3593 true Chr3: 3533255-3536847 Arabidopsis thaliana
AT3G11280 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3534848-3536847 Arabidopsis thaliana
AT3G11280 2.0kb downstream 2.0kb downstream 3593 true Chr3: 3531255-3534847 Arabidopsis thaliana
AT3G11280 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3531255-3533254 Arabidopsis thaliana
AT3G11280 5.0kb upstream 5.0kb upstream 6593 true Chr3: 3533255-3539847 Arabidopsis thaliana
AT3G11280 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3534848-3539847 Arabidopsis thaliana
AT3G11280 5.0kb downstream 5.0kb downstream 6593 true Chr3: 3528255-3534847 Arabidopsis thaliana
AT3G11280 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3528255-3533254 Arabidopsis thaliana
AT3G11280 10.0kb upstream 10.0kb upstream 11593 true Chr3: 3533255-3544847 Arabidopsis thaliana
AT3G11280 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3534848-3544847 Arabidopsis thaliana
AT3G11280 10.0kb downstream 10.0kb downstream 11593 true Chr3: 3523255-3534847 Arabidopsis thaliana
AT3G11280 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3523255-3533254 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121792864 5273 Angiosperm View MSA
122371027 5261 Brassicaceae View MSA
123835671 5264 Brassicales-Malvales View MSA
124347714 5266 SBM View MSA
124245031 5268 Malvidae View MSA
124064393 5270 Rosid View MSA
123746723 5271 Pentapetalae View MSA
122798692 5272 Eudicot View MSA
121064059 5274 Embryophyte View MSA
123426863 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.946        
cufflinks 18.906        
cufflinks 8.712        
cufflinks 22.507       High
cufflinks 6.8       Low
cufflinks 13.042        

0 Strain