Gene : AT3G11250 A. thaliana TAIR10
Defline:  (1 of 3) K02941 - large subunit ribosomal protein LP0 (RP-LP0, RPLP0) Genomic Order:  1096
Name:  ? AT3G11250 Secondary Identifier:  ? PAC:19660086
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G11250 0.5kb upstream 0.5kb upstream 2145 true Chr3: 3520857-3523001 Arabidopsis thaliana
AT3G11250 0.5kb upstream 0.5kb upstream 500 false Chr3: 3520857-3521356 Arabidopsis thaliana
AT3G11250 0.5kb downstream 0.5kb downstream 2145 true Chr3: 3521357-3523501 Arabidopsis thaliana
AT3G11250 0.5kb downstream 0.5kb downstream 500 false Chr3: 3523002-3523501 Arabidopsis thaliana
AT3G11250 1.0kb upstream 1.0kb upstream 2645 true Chr3: 3520357-3523001 Arabidopsis thaliana
AT3G11250 1.0kb upstream 1.0kb upstream 1000 false Chr3: 3520357-3521356 Arabidopsis thaliana
AT3G11250 1.0kb downstream 1.0kb downstream 2645 true Chr3: 3521357-3524001 Arabidopsis thaliana
AT3G11250 1.0kb downstream 1.0kb downstream 1000 false Chr3: 3523002-3524001 Arabidopsis thaliana
AT3G11250 2.0kb upstream 2.0kb upstream 3645 true Chr3: 3519357-3523001 Arabidopsis thaliana
AT3G11250 2.0kb upstream 2.0kb upstream 2000 false Chr3: 3519357-3521356 Arabidopsis thaliana
AT3G11250 2.0kb downstream 2.0kb downstream 3645 true Chr3: 3521357-3525001 Arabidopsis thaliana
AT3G11250 2.0kb downstream 2.0kb downstream 2000 false Chr3: 3523002-3525001 Arabidopsis thaliana
AT3G11250 5.0kb upstream 5.0kb upstream 6645 true Chr3: 3516357-3523001 Arabidopsis thaliana
AT3G11250 5.0kb upstream 5.0kb upstream 5000 false Chr3: 3516357-3521356 Arabidopsis thaliana
AT3G11250 5.0kb downstream 5.0kb downstream 6645 true Chr3: 3521357-3528001 Arabidopsis thaliana
AT3G11250 5.0kb downstream 5.0kb downstream 5000 false Chr3: 3523002-3528001 Arabidopsis thaliana
AT3G11250 10.0kb upstream 10.0kb upstream 11645 true Chr3: 3511357-3523001 Arabidopsis thaliana
AT3G11250 10.0kb upstream 10.0kb upstream 10000 false Chr3: 3511357-3521356 Arabidopsis thaliana
AT3G11250 10.0kb downstream 10.0kb downstream 11645 true Chr3: 3521357-3533001 Arabidopsis thaliana
AT3G11250 10.0kb downstream 10.0kb downstream 10000 false Chr3: 3523002-3533001 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378301 5261 Brassicaceae View MSA
123836746 5264 Brassicales-Malvales View MSA
124342925 5266 SBM View MSA
124243369 5268 Malvidae View MSA
124061567 5270 Rosid View MSA
123747108 5271 Pentapetalae View MSA
122786385 5272 Eudicot View MSA
122042027 5273 Angiosperm View MSA
121345246 5274 Embryophyte View MSA
123428323 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.659        
cufflinks 30.994     High  
cufflinks 20.255        
cufflinks 33.78     High  
cufflinks 17.937       Low
cufflinks 39.526     High High

0 Strain