Gene : AT3G27770 A. thaliana TAIR10
Genomic Order:  2937 Name:  ? AT3G27770
Secondary Identifier:  ? PAC:19659561
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G27770 0.5kb upstream 0.5kb upstream 2619 true Chr3: 10285657-10288275 Arabidopsis thaliana
AT3G27770 0.5kb upstream 0.5kb upstream 500 false Chr3: 10287776-10288275 Arabidopsis thaliana
AT3G27770 0.5kb downstream 0.5kb downstream 2619 true Chr3: 10285157-10287775 Arabidopsis thaliana
AT3G27770 0.5kb downstream 0.5kb downstream 500 false Chr3: 10285157-10285656 Arabidopsis thaliana
AT3G27770 1.0kb upstream 1.0kb upstream 3119 true Chr3: 10285657-10288775 Arabidopsis thaliana
AT3G27770 1.0kb upstream 1.0kb upstream 1000 false Chr3: 10287776-10288775 Arabidopsis thaliana
AT3G27770 1.0kb downstream 1.0kb downstream 3119 true Chr3: 10284657-10287775 Arabidopsis thaliana
AT3G27770 1.0kb downstream 1.0kb downstream 1000 false Chr3: 10284657-10285656 Arabidopsis thaliana
AT3G27770 2.0kb upstream 2.0kb upstream 4119 true Chr3: 10285657-10289775 Arabidopsis thaliana
AT3G27770 2.0kb upstream 2.0kb upstream 2000 false Chr3: 10287776-10289775 Arabidopsis thaliana
AT3G27770 2.0kb downstream 2.0kb downstream 4119 true Chr3: 10283657-10287775 Arabidopsis thaliana
AT3G27770 2.0kb downstream 2.0kb downstream 2000 false Chr3: 10283657-10285656 Arabidopsis thaliana
AT3G27770 5.0kb upstream 5.0kb upstream 7119 true Chr3: 10285657-10292775 Arabidopsis thaliana
AT3G27770 5.0kb upstream 5.0kb upstream 5000 false Chr3: 10287776-10292775 Arabidopsis thaliana
AT3G27770 5.0kb downstream 5.0kb downstream 7119 true Chr3: 10280657-10287775 Arabidopsis thaliana
AT3G27770 5.0kb downstream 5.0kb downstream 5000 false Chr3: 10280657-10285656 Arabidopsis thaliana
AT3G27770 10.0kb upstream 10.0kb upstream 12119 true Chr3: 10285657-10297775 Arabidopsis thaliana
AT3G27770 10.0kb upstream 10.0kb upstream 10000 false Chr3: 10287776-10297775 Arabidopsis thaliana
AT3G27770 10.0kb downstream 10.0kb downstream 12119 true Chr3: 10275657-10287775 Arabidopsis thaliana
AT3G27770 10.0kb downstream 10.0kb downstream 10000 false Chr3: 10275657-10285656 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779751 5273 Angiosperm View MSA
122375277 5261 Brassicaceae View MSA
123800919 5264 Brassicales-Malvales View MSA
124298276 5266 SBM View MSA
124248598 5268 Malvidae View MSA
124071570 5270 Rosid View MSA
123744086 5271 Pentapetalae View MSA
122770897 5272 Eudicot View MSA
121350549 5274 Embryophyte View MSA
123427576 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.454        
cufflinks 16.723        
cufflinks 25.845       High
cufflinks 17.794        
cufflinks 25.204       High
cufflinks 14.966       Low

0 Strain