Gene : TOM20-3 A. thaliana TAIR10
Primary Identifier:  ? AT3G27080 Defline:  (1 of 4) PTHR32409//PTHR32409:SF3 - FAMILY NOT NAMED // MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20-1-RELATED
Genomic Order:  2862 Name:  ? AT3G27080
Secondary Identifier:  ? PAC:19660248
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G27080 0.5kb upstream 0.5kb upstream 2051 true Chr3: 9985079-9987129 Arabidopsis thaliana
AT3G27080 0.5kb upstream 0.5kb upstream 500 false Chr3: 9986630-9987129 Arabidopsis thaliana
AT3G27080 0.5kb downstream 0.5kb downstream 2051 true Chr3: 9984579-9986629 Arabidopsis thaliana
AT3G27080 0.5kb downstream 0.5kb downstream 500 false Chr3: 9984579-9985078 Arabidopsis thaliana
AT3G27080 1.0kb upstream 1.0kb upstream 2551 true Chr3: 9985079-9987629 Arabidopsis thaliana
AT3G27080 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9986630-9987629 Arabidopsis thaliana
AT3G27080 1.0kb downstream 1.0kb downstream 2551 true Chr3: 9984079-9986629 Arabidopsis thaliana
AT3G27080 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9984079-9985078 Arabidopsis thaliana
AT3G27080 2.0kb upstream 2.0kb upstream 3551 true Chr3: 9985079-9988629 Arabidopsis thaliana
AT3G27080 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9986630-9988629 Arabidopsis thaliana
AT3G27080 2.0kb downstream 2.0kb downstream 3551 true Chr3: 9983079-9986629 Arabidopsis thaliana
AT3G27080 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9983079-9985078 Arabidopsis thaliana
AT3G27080 5.0kb upstream 5.0kb upstream 6551 true Chr3: 9985079-9991629 Arabidopsis thaliana
AT3G27080 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9986630-9991629 Arabidopsis thaliana
AT3G27080 5.0kb downstream 5.0kb downstream 6551 true Chr3: 9980079-9986629 Arabidopsis thaliana
AT3G27080 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9980079-9985078 Arabidopsis thaliana
AT3G27080 10.0kb upstream 10.0kb upstream 11551 true Chr3: 9985079-9996629 Arabidopsis thaliana
AT3G27080 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9986630-9996629 Arabidopsis thaliana
AT3G27080 10.0kb downstream 10.0kb downstream 11551 true Chr3: 9975079-9986629 Arabidopsis thaliana
AT3G27080 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9975079-9985078 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026369 5273 Angiosperm View MSA
122368739 5261 Brassicaceae View MSA
123838837 5264 Brassicales-Malvales View MSA
124346713 5266 SBM View MSA
124243772 5268 Malvidae View MSA
124065101 5270 Rosid View MSA
123751692 5271 Pentapetalae View MSA
122795762 5272 Eudicot View MSA
121344161 5274 Embryophyte View MSA
123425894 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 17.188        
cufflinks 24.217        
cufflinks 16.447        
cufflinks 23.948        
cufflinks 14.63       Low
cufflinks 27.679       High

0 Strain