Gene : AT3G25572 A. thaliana TAIR10
Defline:  (1 of 3) PTHR35727//PTHR35727:SF1 - FAMILY NOT NAMED // CONSERVED PEPTIDE UPSTREAM OPEN READING FRAME 10-RELATED Genomic Order:  2681
Name:  ? AT3G25572 Secondary Identifier:  ? PAC:19663399
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G25572 0.5kb upstream 0.5kb upstream 2576 true Chr3: 9287263-9289838 Arabidopsis thaliana
AT3G25572 0.5kb upstream 0.5kb upstream 500 false Chr3: 9289339-9289838 Arabidopsis thaliana
AT3G25572 0.5kb downstream 0.5kb downstream 2576 true Chr3: 9286763-9289338 Arabidopsis thaliana
AT3G25572 0.5kb downstream 0.5kb downstream 500 false Chr3: 9286763-9287262 Arabidopsis thaliana
AT3G25572 1.0kb upstream 1.0kb upstream 3076 true Chr3: 9287263-9290338 Arabidopsis thaliana
AT3G25572 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9289339-9290338 Arabidopsis thaliana
AT3G25572 1.0kb downstream 1.0kb downstream 3076 true Chr3: 9286263-9289338 Arabidopsis thaliana
AT3G25572 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9286263-9287262 Arabidopsis thaliana
AT3G25572 2.0kb upstream 2.0kb upstream 4076 true Chr3: 9287263-9291338 Arabidopsis thaliana
AT3G25572 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9289339-9291338 Arabidopsis thaliana
AT3G25572 2.0kb downstream 2.0kb downstream 4076 true Chr3: 9285263-9289338 Arabidopsis thaliana
AT3G25572 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9285263-9287262 Arabidopsis thaliana
AT3G25572 5.0kb upstream 5.0kb upstream 7076 true Chr3: 9287263-9294338 Arabidopsis thaliana
AT3G25572 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9289339-9294338 Arabidopsis thaliana
AT3G25572 5.0kb downstream 5.0kb downstream 7076 true Chr3: 9282263-9289338 Arabidopsis thaliana
AT3G25572 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9282263-9287262 Arabidopsis thaliana
AT3G25572 10.0kb upstream 10.0kb upstream 12076 true Chr3: 9287263-9299338 Arabidopsis thaliana
AT3G25572 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9289339-9299338 Arabidopsis thaliana
AT3G25572 10.0kb downstream 10.0kb downstream 12076 true Chr3: 9277263-9289338 Arabidopsis thaliana
AT3G25572 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9277263-9287262 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122344063 5261 Brassicaceae View MSA
123784120 5264 Brassicales-Malvales View MSA
124282319 5266 SBM View MSA
124252061 5268 Malvidae View MSA
124069514 5270 Rosid View MSA
123743375 5271 Pentapetalae View MSA
122770636 5272 Eudicot View MSA
122049169 5273 Angiosperm View MSA
121348872 5274 Embryophyte View MSA
123381051 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain