Gene : AT3G25160 A. thaliana TAIR10
Defline:  (1 of 1) PTHR10585//PTHR10585:SF36 - ER LUMEN PROTEIN RETAINING RECEPTOR // SUBFAMILY NOT NAMED Genomic Order:  2645
Name:  ? AT3G25160 Secondary Identifier:  ? PAC:19661594
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G25160 0.5kb upstream 0.5kb upstream 2400 true Chr3: 9160168-9162567 Arabidopsis thaliana
AT3G25160 0.5kb upstream 0.5kb upstream 500 false Chr3: 9162068-9162567 Arabidopsis thaliana
AT3G25160 0.5kb downstream 0.5kb downstream 2400 true Chr3: 9159668-9162067 Arabidopsis thaliana
AT3G25160 0.5kb downstream 0.5kb downstream 500 false Chr3: 9159668-9160167 Arabidopsis thaliana
AT3G25160 1.0kb upstream 1.0kb upstream 2900 true Chr3: 9160168-9163067 Arabidopsis thaliana
AT3G25160 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9162068-9163067 Arabidopsis thaliana
AT3G25160 1.0kb downstream 1.0kb downstream 2900 true Chr3: 9159168-9162067 Arabidopsis thaliana
AT3G25160 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9159168-9160167 Arabidopsis thaliana
AT3G25160 2.0kb upstream 2.0kb upstream 3900 true Chr3: 9160168-9164067 Arabidopsis thaliana
AT3G25160 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9162068-9164067 Arabidopsis thaliana
AT3G25160 2.0kb downstream 2.0kb downstream 3900 true Chr3: 9158168-9162067 Arabidopsis thaliana
AT3G25160 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9158168-9160167 Arabidopsis thaliana
AT3G25160 5.0kb upstream 5.0kb upstream 6900 true Chr3: 9160168-9167067 Arabidopsis thaliana
AT3G25160 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9162068-9167067 Arabidopsis thaliana
AT3G25160 5.0kb downstream 5.0kb downstream 6900 true Chr3: 9155168-9162067 Arabidopsis thaliana
AT3G25160 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9155168-9160167 Arabidopsis thaliana
AT3G25160 10.0kb upstream 10.0kb upstream 11900 true Chr3: 9160168-9172067 Arabidopsis thaliana
AT3G25160 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9162068-9172067 Arabidopsis thaliana
AT3G25160 10.0kb downstream 10.0kb downstream 11900 true Chr3: 9150168-9162067 Arabidopsis thaliana
AT3G25160 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9150168-9160167 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362926 5261 Brassicaceae View MSA
123839887 5264 Brassicales-Malvales View MSA
124344782 5266 SBM View MSA
124241671 5268 Malvidae View MSA
124064321 5270 Rosid View MSA
123752811 5271 Pentapetalae View MSA
122786359 5272 Eudicot View MSA
122047549 5273 Angiosperm View MSA
121310757 5274 Embryophyte View MSA
123348166 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.008     Low Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.034     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.032     Low  
cufflinks 0.0     Not Expressed Not Expressed

0 Strain