Gene : LAG1 A. thaliana TAIR10
Primary Identifier:  ? AT3G25540 Defline:  (1 of 3) PTHR12560:SF13 - LAG1 LONGEVITY ASSURANCE HOMOLOG 1-RELATED
Genomic Order:  2676 Name:  ? AT3G25540
Secondary Identifier:  ? PAC:19659539
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G25540 0.5kb upstream 0.5kb upstream 2851 true Chr3: 9273835-9276685 Arabidopsis thaliana
AT3G25540 0.5kb upstream 0.5kb upstream 500 false Chr3: 9273835-9274334 Arabidopsis thaliana
AT3G25540 0.5kb downstream 0.5kb downstream 2851 true Chr3: 9274335-9277185 Arabidopsis thaliana
AT3G25540 0.5kb downstream 0.5kb downstream 500 false Chr3: 9276686-9277185 Arabidopsis thaliana
AT3G25540 1.0kb upstream 1.0kb upstream 3351 true Chr3: 9273335-9276685 Arabidopsis thaliana
AT3G25540 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9273335-9274334 Arabidopsis thaliana
AT3G25540 1.0kb downstream 1.0kb downstream 3351 true Chr3: 9274335-9277685 Arabidopsis thaliana
AT3G25540 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9276686-9277685 Arabidopsis thaliana
AT3G25540 2.0kb upstream 2.0kb upstream 4351 true Chr3: 9272335-9276685 Arabidopsis thaliana
AT3G25540 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9272335-9274334 Arabidopsis thaliana
AT3G25540 2.0kb downstream 2.0kb downstream 4351 true Chr3: 9274335-9278685 Arabidopsis thaliana
AT3G25540 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9276686-9278685 Arabidopsis thaliana
AT3G25540 5.0kb upstream 5.0kb upstream 7351 true Chr3: 9269335-9276685 Arabidopsis thaliana
AT3G25540 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9269335-9274334 Arabidopsis thaliana
AT3G25540 5.0kb downstream 5.0kb downstream 7351 true Chr3: 9274335-9281685 Arabidopsis thaliana
AT3G25540 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9276686-9281685 Arabidopsis thaliana
AT3G25540 10.0kb upstream 10.0kb upstream 12351 true Chr3: 9264335-9276685 Arabidopsis thaliana
AT3G25540 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9264335-9274334 Arabidopsis thaliana
AT3G25540 10.0kb downstream 10.0kb downstream 12351 true Chr3: 9274335-9286685 Arabidopsis thaliana
AT3G25540 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9276686-9286685 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378281 5261 Brassicaceae View MSA
123838645 5264 Brassicales-Malvales View MSA
124347984 5266 SBM View MSA
124254290 5268 Malvidae View MSA
124065846 5270 Rosid View MSA
123739424 5271 Pentapetalae View MSA
122796577 5272 Eudicot View MSA
122046862 5273 Angiosperm View MSA
121348140 5274 Embryophyte View MSA
123428118 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.738        
cufflinks 15.321        
cufflinks 9.59       Low
cufflinks 15.523        
cufflinks 9.891       Low
cufflinks 18.604       High

0 Strain