Gene : ERD2B A. thaliana TAIR10
Primary Identifier:  ? AT3G25040 Defline:  (1 of 1) PTHR10585//PTHR10585:SF29 - ER LUMEN PROTEIN RETAINING RECEPTOR // SUBFAMILY NOT NAMED
Genomic Order:  2632 Name:  ? AT3G25040
Secondary Identifier:  ? PAC:19659855
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G25040 0.5kb upstream 0.5kb upstream 2495 true Chr3: 9123804-9126298 Arabidopsis thaliana
AT3G25040 0.5kb upstream 0.5kb upstream 500 false Chr3: 9123804-9124303 Arabidopsis thaliana
AT3G25040 0.5kb downstream 0.5kb downstream 2495 true Chr3: 9124304-9126798 Arabidopsis thaliana
AT3G25040 0.5kb downstream 0.5kb downstream 500 false Chr3: 9126299-9126798 Arabidopsis thaliana
AT3G25040 1.0kb upstream 1.0kb upstream 2995 true Chr3: 9123304-9126298 Arabidopsis thaliana
AT3G25040 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9123304-9124303 Arabidopsis thaliana
AT3G25040 1.0kb downstream 1.0kb downstream 2995 true Chr3: 9124304-9127298 Arabidopsis thaliana
AT3G25040 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9126299-9127298 Arabidopsis thaliana
AT3G25040 2.0kb upstream 2.0kb upstream 3995 true Chr3: 9122304-9126298 Arabidopsis thaliana
AT3G25040 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9122304-9124303 Arabidopsis thaliana
AT3G25040 2.0kb downstream 2.0kb downstream 3995 true Chr3: 9124304-9128298 Arabidopsis thaliana
AT3G25040 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9126299-9128298 Arabidopsis thaliana
AT3G25040 5.0kb upstream 5.0kb upstream 6995 true Chr3: 9119304-9126298 Arabidopsis thaliana
AT3G25040 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9119304-9124303 Arabidopsis thaliana
AT3G25040 5.0kb downstream 5.0kb downstream 6995 true Chr3: 9124304-9131298 Arabidopsis thaliana
AT3G25040 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9126299-9131298 Arabidopsis thaliana
AT3G25040 10.0kb upstream 10.0kb upstream 11995 true Chr3: 9114304-9126298 Arabidopsis thaliana
AT3G25040 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9114304-9124303 Arabidopsis thaliana
AT3G25040 10.0kb downstream 10.0kb downstream 11995 true Chr3: 9124304-9136298 Arabidopsis thaliana
AT3G25040 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9126299-9136298 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369309 5261 Brassicaceae View MSA
123840941 5264 Brassicales-Malvales View MSA
124351450 5266 SBM View MSA
124253206 5268 Malvidae View MSA
124069792 5270 Rosid View MSA
123751554 5271 Pentapetalae View MSA
122794159 5272 Eudicot View MSA
122048237 5273 Angiosperm View MSA
121347107 5274 Embryophyte View MSA
123428809 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 24.344        
cufflinks 29.825     High  
cufflinks 18.72       Low
cufflinks 31.558     High  
cufflinks 19.693       Low
cufflinks 34.079     High High

0 Strain