Gene : PRT1 A. thaliana TAIR10
Primary Identifier:  ? AT3G24800 Defline:  (1 of 1) PTHR15898//PTHR15898:SF1 - UNCHARACTERIZED // GLUCOSE-INDUCED DEGRADATION PROTEIN 4 HOMOLOG
Genomic Order:  2613 Name:  ? AT3G24800
Secondary Identifier:  ? PAC:19660228
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G24800 0.5kb upstream 0.5kb upstream 2990 true Chr3: 9055009-9057998 Arabidopsis thaliana
AT3G24800 0.5kb upstream 0.5kb upstream 500 false Chr3: 9055009-9055508 Arabidopsis thaliana
AT3G24800 0.5kb downstream 0.5kb downstream 2990 true Chr3: 9055509-9058498 Arabidopsis thaliana
AT3G24800 0.5kb downstream 0.5kb downstream 500 false Chr3: 9057999-9058498 Arabidopsis thaliana
AT3G24800 1.0kb upstream 1.0kb upstream 3490 true Chr3: 9054509-9057998 Arabidopsis thaliana
AT3G24800 1.0kb upstream 1.0kb upstream 1000 false Chr3: 9054509-9055508 Arabidopsis thaliana
AT3G24800 1.0kb downstream 1.0kb downstream 3490 true Chr3: 9055509-9058998 Arabidopsis thaliana
AT3G24800 1.0kb downstream 1.0kb downstream 1000 false Chr3: 9057999-9058998 Arabidopsis thaliana
AT3G24800 2.0kb upstream 2.0kb upstream 4490 true Chr3: 9053509-9057998 Arabidopsis thaliana
AT3G24800 2.0kb upstream 2.0kb upstream 2000 false Chr3: 9053509-9055508 Arabidopsis thaliana
AT3G24800 2.0kb downstream 2.0kb downstream 4490 true Chr3: 9055509-9059998 Arabidopsis thaliana
AT3G24800 2.0kb downstream 2.0kb downstream 2000 false Chr3: 9057999-9059998 Arabidopsis thaliana
AT3G24800 5.0kb upstream 5.0kb upstream 7490 true Chr3: 9050509-9057998 Arabidopsis thaliana
AT3G24800 5.0kb upstream 5.0kb upstream 5000 false Chr3: 9050509-9055508 Arabidopsis thaliana
AT3G24800 5.0kb downstream 5.0kb downstream 7490 true Chr3: 9055509-9062998 Arabidopsis thaliana
AT3G24800 5.0kb downstream 5.0kb downstream 5000 false Chr3: 9057999-9062998 Arabidopsis thaliana
AT3G24800 10.0kb upstream 10.0kb upstream 12490 true Chr3: 9045509-9057998 Arabidopsis thaliana
AT3G24800 10.0kb upstream 10.0kb upstream 10000 false Chr3: 9045509-9055508 Arabidopsis thaliana
AT3G24800 10.0kb downstream 10.0kb downstream 12490 true Chr3: 9055509-9067998 Arabidopsis thaliana
AT3G24800 10.0kb downstream 10.0kb downstream 10000 false Chr3: 9057999-9067998 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376266 5261 Brassicaceae View MSA
123836090 5264 Brassicales-Malvales View MSA
124350084 5266 SBM View MSA
124245890 5268 Malvidae View MSA
124060763 5270 Rosid View MSA
123743131 5271 Pentapetalae View MSA
122792219 5272 Eudicot View MSA
122046771 5273 Angiosperm View MSA
121351616 5274 Embryophyte View MSA
123427773 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.932        
cufflinks 15.636        
cufflinks 5.056        
cufflinks 14.618        
cufflinks 4.284       Low
cufflinks 15.988        

0 Strain