Gene : XTH16 A. thaliana TAIR10
Primary Identifier:  ? AT3G23730 Defline:  (1 of 2) PTHR31062:SF34 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 15-RELATED
Genomic Order:  2493 Name:  ? AT3G23730
Secondary Identifier:  ? PAC:19665050
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G23730 0.5kb upstream 0.5kb upstream 1726 true Chr3: 8549610-8551335 Arabidopsis thaliana
AT3G23730 0.5kb upstream 0.5kb upstream 500 false Chr3: 8549610-8550109 Arabidopsis thaliana
AT3G23730 0.5kb downstream 0.5kb downstream 1726 true Chr3: 8550110-8551835 Arabidopsis thaliana
AT3G23730 0.5kb downstream 0.5kb downstream 500 false Chr3: 8551336-8551835 Arabidopsis thaliana
AT3G23730 1.0kb upstream 1.0kb upstream 2226 true Chr3: 8549110-8551335 Arabidopsis thaliana
AT3G23730 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8549110-8550109 Arabidopsis thaliana
AT3G23730 1.0kb downstream 1.0kb downstream 2226 true Chr3: 8550110-8552335 Arabidopsis thaliana
AT3G23730 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8551336-8552335 Arabidopsis thaliana
AT3G23730 2.0kb upstream 2.0kb upstream 3226 true Chr3: 8548110-8551335 Arabidopsis thaliana
AT3G23730 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8548110-8550109 Arabidopsis thaliana
AT3G23730 2.0kb downstream 2.0kb downstream 3226 true Chr3: 8550110-8553335 Arabidopsis thaliana
AT3G23730 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8551336-8553335 Arabidopsis thaliana
AT3G23730 5.0kb upstream 5.0kb upstream 6226 true Chr3: 8545110-8551335 Arabidopsis thaliana
AT3G23730 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8545110-8550109 Arabidopsis thaliana
AT3G23730 5.0kb downstream 5.0kb downstream 6226 true Chr3: 8550110-8556335 Arabidopsis thaliana
AT3G23730 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8551336-8556335 Arabidopsis thaliana
AT3G23730 10.0kb upstream 10.0kb upstream 11226 true Chr3: 8540110-8551335 Arabidopsis thaliana
AT3G23730 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8540110-8550109 Arabidopsis thaliana
AT3G23730 10.0kb downstream 10.0kb downstream 11226 true Chr3: 8550110-8561335 Arabidopsis thaliana
AT3G23730 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8551336-8561335 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360823 5261 Brassicaceae View MSA
123838482 5264 Brassicales-Malvales View MSA
124350523 5266 SBM View MSA
124248515 5268 Malvidae View MSA
124074397 5270 Rosid View MSA
123749278 5271 Pentapetalae View MSA
122796709 5272 Eudicot View MSA
122046395 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.739     High High
cufflinks 17.614       Low
cufflinks 21.742        
cufflinks 27.589        
cufflinks 17.778        
cufflinks 29.852     High  

0 Strain