Gene : AT3G23540 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12277:SF58 - ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN Genomic Order:  2468
Name:  ? AT3G23540 Secondary Identifier:  ? PAC:19662045
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G23540 0.5kb upstream 0.5kb upstream 5126 true Chr3: 8442945-8448070 Arabidopsis thaliana
AT3G23540 0.5kb upstream 0.5kb upstream 500 false Chr3: 8442945-8443444 Arabidopsis thaliana
AT3G23540 0.5kb downstream 0.5kb downstream 5126 true Chr3: 8443445-8448570 Arabidopsis thaliana
AT3G23540 0.5kb downstream 0.5kb downstream 500 false Chr3: 8448071-8448570 Arabidopsis thaliana
AT3G23540 1.0kb upstream 1.0kb upstream 5626 true Chr3: 8442445-8448070 Arabidopsis thaliana
AT3G23540 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8442445-8443444 Arabidopsis thaliana
AT3G23540 1.0kb downstream 1.0kb downstream 5626 true Chr3: 8443445-8449070 Arabidopsis thaliana
AT3G23540 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8448071-8449070 Arabidopsis thaliana
AT3G23540 2.0kb upstream 2.0kb upstream 6626 true Chr3: 8441445-8448070 Arabidopsis thaliana
AT3G23540 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8441445-8443444 Arabidopsis thaliana
AT3G23540 2.0kb downstream 2.0kb downstream 6626 true Chr3: 8443445-8450070 Arabidopsis thaliana
AT3G23540 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8448071-8450070 Arabidopsis thaliana
AT3G23540 5.0kb upstream 5.0kb upstream 9626 true Chr3: 8438445-8448070 Arabidopsis thaliana
AT3G23540 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8438445-8443444 Arabidopsis thaliana
AT3G23540 5.0kb downstream 5.0kb downstream 9626 true Chr3: 8443445-8453070 Arabidopsis thaliana
AT3G23540 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8448071-8453070 Arabidopsis thaliana
AT3G23540 10.0kb upstream 10.0kb upstream 14626 true Chr3: 8433445-8448070 Arabidopsis thaliana
AT3G23540 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8433445-8443444 Arabidopsis thaliana
AT3G23540 10.0kb downstream 10.0kb downstream 14626 true Chr3: 8443445-8458070 Arabidopsis thaliana
AT3G23540 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8448071-8458070 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367635 5261 Brassicaceae View MSA
123837635 5264 Brassicales-Malvales View MSA
124339881 5266 SBM View MSA
124239585 5268 Malvidae View MSA
124064607 5270 Rosid View MSA
123753739 5271 Pentapetalae View MSA
122791791 5272 Eudicot View MSA
122047952 5273 Angiosperm View MSA
121347410 5274 Embryophyte View MSA
123427961 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.747        
cufflinks 4.83        
cufflinks 2.609       Low
cufflinks 5.836       High
cufflinks 3.366        
cufflinks 4.894        

0 Strain