Gene : AT3G23090 A. thaliana TAIR10
Defline:  (1 of 15) PF06886 - Targeting protein for Xklp2 (TPX2) (TPX2) Genomic Order:  2416
Name:  ? AT3G23090 Secondary Identifier:  ? PAC:19658713
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G23090 0.5kb upstream 0.5kb upstream 3287 true Chr3: 8214301-8217587 Arabidopsis thaliana
AT3G23090 0.5kb upstream 0.5kb upstream 500 false Chr3: 8217088-8217587 Arabidopsis thaliana
AT3G23090 0.5kb downstream 0.5kb downstream 3287 true Chr3: 8213801-8217087 Arabidopsis thaliana
AT3G23090 0.5kb downstream 0.5kb downstream 500 false Chr3: 8213801-8214300 Arabidopsis thaliana
AT3G23090 1.0kb upstream 1.0kb upstream 3787 true Chr3: 8214301-8218087 Arabidopsis thaliana
AT3G23090 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8217088-8218087 Arabidopsis thaliana
AT3G23090 1.0kb downstream 1.0kb downstream 3787 true Chr3: 8213301-8217087 Arabidopsis thaliana
AT3G23090 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8213301-8214300 Arabidopsis thaliana
AT3G23090 2.0kb upstream 2.0kb upstream 4787 true Chr3: 8214301-8219087 Arabidopsis thaliana
AT3G23090 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8217088-8219087 Arabidopsis thaliana
AT3G23090 2.0kb downstream 2.0kb downstream 4787 true Chr3: 8212301-8217087 Arabidopsis thaliana
AT3G23090 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8212301-8214300 Arabidopsis thaliana
AT3G23090 5.0kb upstream 5.0kb upstream 7787 true Chr3: 8214301-8222087 Arabidopsis thaliana
AT3G23090 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8217088-8222087 Arabidopsis thaliana
AT3G23090 5.0kb downstream 5.0kb downstream 7787 true Chr3: 8209301-8217087 Arabidopsis thaliana
AT3G23090 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8209301-8214300 Arabidopsis thaliana
AT3G23090 10.0kb upstream 10.0kb upstream 12787 true Chr3: 8214301-8227087 Arabidopsis thaliana
AT3G23090 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8217088-8227087 Arabidopsis thaliana
AT3G23090 10.0kb downstream 10.0kb downstream 12787 true Chr3: 8204301-8217087 Arabidopsis thaliana
AT3G23090 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8204301-8214300 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360917 5261 Brassicaceae View MSA
123827565 5264 Brassicales-Malvales View MSA
124337363 5266 SBM View MSA
124237920 5268 Malvidae View MSA
124067460 5270 Rosid View MSA
123749584 5271 Pentapetalae View MSA
122790813 5272 Eudicot View MSA
122045686 5273 Angiosperm View MSA
121351484 5274 Embryophyte View MSA
123382183 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.337        
cufflinks 18.852        
cufflinks 0.731        
cufflinks 14.613        
cufflinks 0.505       Low
cufflinks 26.82       High

0 Strain