Gene : AT3G23390 A. thaliana TAIR10
Defline:  (1 of 2) K02929 - large subunit ribosomal protein L44e (RP-L44e, RPL44) Genomic Order:  2455
Name:  ? AT3G23390 Secondary Identifier:  ? PAC:19664496
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G23390 0.5kb upstream 0.5kb upstream 1521 true Chr3: 8374872-8376392 Arabidopsis thaliana
AT3G23390 0.5kb upstream 0.5kb upstream 500 false Chr3: 8374872-8375371 Arabidopsis thaliana
AT3G23390 0.5kb downstream 0.5kb downstream 1521 true Chr3: 8375372-8376892 Arabidopsis thaliana
AT3G23390 0.5kb downstream 0.5kb downstream 500 false Chr3: 8376393-8376892 Arabidopsis thaliana
AT3G23390 1.0kb upstream 1.0kb upstream 2021 true Chr3: 8374372-8376392 Arabidopsis thaliana
AT3G23390 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8374372-8375371 Arabidopsis thaliana
AT3G23390 1.0kb downstream 1.0kb downstream 2021 true Chr3: 8375372-8377392 Arabidopsis thaliana
AT3G23390 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8376393-8377392 Arabidopsis thaliana
AT3G23390 2.0kb upstream 2.0kb upstream 3021 true Chr3: 8373372-8376392 Arabidopsis thaliana
AT3G23390 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8373372-8375371 Arabidopsis thaliana
AT3G23390 2.0kb downstream 2.0kb downstream 3021 true Chr3: 8375372-8378392 Arabidopsis thaliana
AT3G23390 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8376393-8378392 Arabidopsis thaliana
AT3G23390 5.0kb upstream 5.0kb upstream 6021 true Chr3: 8370372-8376392 Arabidopsis thaliana
AT3G23390 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8370372-8375371 Arabidopsis thaliana
AT3G23390 5.0kb downstream 5.0kb downstream 6021 true Chr3: 8375372-8381392 Arabidopsis thaliana
AT3G23390 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8376393-8381392 Arabidopsis thaliana
AT3G23390 10.0kb upstream 10.0kb upstream 11021 true Chr3: 8365372-8376392 Arabidopsis thaliana
AT3G23390 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8365372-8375371 Arabidopsis thaliana
AT3G23390 10.0kb downstream 10.0kb downstream 11021 true Chr3: 8375372-8386392 Arabidopsis thaliana
AT3G23390 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8376393-8386392 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380750 5261 Brassicaceae View MSA
123835254 5264 Brassicales-Malvales View MSA
124343596 5266 SBM View MSA
124248795 5268 Malvidae View MSA
124071237 5270 Rosid View MSA
123753764 5271 Pentapetalae View MSA
122788478 5272 Eudicot View MSA
122044420 5273 Angiosperm View MSA
121349788 5274 Embryophyte View MSA
123423968 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 89.056     High  
cufflinks 121.145     High  
cufflinks 79.255     High  
cufflinks 123.054     High  
cufflinks 63.672     High Low
cufflinks 147.163     High High

0 Strain