Gene : ARFC1 A. thaliana TAIR10
Primary Identifier:  ? AT3G22950 Defline:  (1 of 1) K07950 - ADP-ribosylation factor-like protein 5B (ARL5B)
Genomic Order:  2400 Name:  ? AT3G22950
Secondary Identifier:  ? PAC:19663391
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G22950 0.5kb upstream 0.5kb upstream 2404 true Chr3: 8136181-8138584 Arabidopsis thaliana
AT3G22950 0.5kb upstream 0.5kb upstream 500 false Chr3: 8138085-8138584 Arabidopsis thaliana
AT3G22950 0.5kb downstream 0.5kb downstream 2404 true Chr3: 8135681-8138084 Arabidopsis thaliana
AT3G22950 0.5kb downstream 0.5kb downstream 500 false Chr3: 8135681-8136180 Arabidopsis thaliana
AT3G22950 1.0kb upstream 1.0kb upstream 2904 true Chr3: 8136181-8139084 Arabidopsis thaliana
AT3G22950 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8138085-8139084 Arabidopsis thaliana
AT3G22950 1.0kb downstream 1.0kb downstream 2904 true Chr3: 8135181-8138084 Arabidopsis thaliana
AT3G22950 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8135181-8136180 Arabidopsis thaliana
AT3G22950 2.0kb upstream 2.0kb upstream 3904 true Chr3: 8136181-8140084 Arabidopsis thaliana
AT3G22950 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8138085-8140084 Arabidopsis thaliana
AT3G22950 2.0kb downstream 2.0kb downstream 3904 true Chr3: 8134181-8138084 Arabidopsis thaliana
AT3G22950 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8134181-8136180 Arabidopsis thaliana
AT3G22950 5.0kb upstream 5.0kb upstream 6904 true Chr3: 8136181-8143084 Arabidopsis thaliana
AT3G22950 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8138085-8143084 Arabidopsis thaliana
AT3G22950 5.0kb downstream 5.0kb downstream 6904 true Chr3: 8131181-8138084 Arabidopsis thaliana
AT3G22950 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8131181-8136180 Arabidopsis thaliana
AT3G22950 10.0kb upstream 10.0kb upstream 11904 true Chr3: 8136181-8148084 Arabidopsis thaliana
AT3G22950 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8138085-8148084 Arabidopsis thaliana
AT3G22950 10.0kb downstream 10.0kb downstream 11904 true Chr3: 8126181-8138084 Arabidopsis thaliana
AT3G22950 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8126181-8136180 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370438 5261 Brassicaceae View MSA
123828626 5264 Brassicales-Malvales View MSA
124337289 5266 SBM View MSA
124237881 5268 Malvidae View MSA
124068641 5270 Rosid View MSA
123737509 5271 Pentapetalae View MSA
122788196 5272 Eudicot View MSA
122049759 5273 Angiosperm View MSA
123429166 5275 Viridiplantae View MSA
121351098 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.606        
cufflinks 9.234        
cufflinks 6.332       Low
cufflinks 9.901        
cufflinks 7.247        
cufflinks 10.09        

0 Strain