Gene : ERF1 A. thaliana TAIR10
Primary Identifier:  ? AT3G23240 Defline:  (1 of 1) K14516 - ethylene-responsive transcription factor 1 (ERF1)
Genomic Order:  2437 Name:  ? AT3G23240
Secondary Identifier:  ? PAC:19664432
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G23240 0.5kb upstream 0.5kb upstream 1461 true Chr3: 8295144-8296604 Arabidopsis thaliana
AT3G23240 0.5kb upstream 0.5kb upstream 500 false Chr3: 8295144-8295643 Arabidopsis thaliana
AT3G23240 0.5kb downstream 0.5kb downstream 1461 true Chr3: 8295644-8297104 Arabidopsis thaliana
AT3G23240 0.5kb downstream 0.5kb downstream 500 false Chr3: 8296605-8297104 Arabidopsis thaliana
AT3G23240 1.0kb upstream 1.0kb upstream 1961 true Chr3: 8294644-8296604 Arabidopsis thaliana
AT3G23240 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8294644-8295643 Arabidopsis thaliana
AT3G23240 1.0kb downstream 1.0kb downstream 1961 true Chr3: 8295644-8297604 Arabidopsis thaliana
AT3G23240 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8296605-8297604 Arabidopsis thaliana
AT3G23240 2.0kb upstream 2.0kb upstream 2961 true Chr3: 8293644-8296604 Arabidopsis thaliana
AT3G23240 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8293644-8295643 Arabidopsis thaliana
AT3G23240 2.0kb downstream 2.0kb downstream 2961 true Chr3: 8295644-8298604 Arabidopsis thaliana
AT3G23240 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8296605-8298604 Arabidopsis thaliana
AT3G23240 5.0kb upstream 5.0kb upstream 5961 true Chr3: 8290644-8296604 Arabidopsis thaliana
AT3G23240 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8290644-8295643 Arabidopsis thaliana
AT3G23240 5.0kb downstream 5.0kb downstream 5961 true Chr3: 8295644-8301604 Arabidopsis thaliana
AT3G23240 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8296605-8301604 Arabidopsis thaliana
AT3G23240 10.0kb upstream 10.0kb upstream 10961 true Chr3: 8285644-8296604 Arabidopsis thaliana
AT3G23240 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8285644-8295643 Arabidopsis thaliana
AT3G23240 10.0kb downstream 10.0kb downstream 10961 true Chr3: 8295644-8306604 Arabidopsis thaliana
AT3G23240 10.0kb downstream 10.0kb downstream 10000 false Chr3: 8296605-8306604 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373610 5261 Brassicaceae View MSA
123838461 5264 Brassicales-Malvales View MSA
124342240 5266 SBM View MSA
124249998 5268 Malvidae View MSA
124074692 5270 Rosid View MSA
123751069 5271 Pentapetalae View MSA
122793913 5272 Eudicot View MSA
122046946 5273 Angiosperm View MSA
123428898 5275 Viridiplantae View MSA
121351000 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.586       Low
cufflinks 8.699        
cufflinks 1.903        
cufflinks 14.235       High
cufflinks 2.731        
cufflinks 4.745        

0 Strain