Gene : AT3G22600 A. thaliana TAIR10
Defline:  (1 of 6) PTHR33044//PTHR33044:SF23 - FAMILY NOT NAMED // BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED Genomic Order:  2363
Name:  ? AT3G22600 Secondary Identifier:  ? PAC:19664722
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G22600 0.5kb upstream 0.5kb upstream 1464 true Chr3: 8006508-8007971 Arabidopsis thaliana
AT3G22600 0.5kb upstream 0.5kb upstream 500 false Chr3: 8007472-8007971 Arabidopsis thaliana
AT3G22600 0.5kb downstream 0.5kb downstream 1464 true Chr3: 8006008-8007471 Arabidopsis thaliana
AT3G22600 0.5kb downstream 0.5kb downstream 500 false Chr3: 8006008-8006507 Arabidopsis thaliana
AT3G22600 1.0kb upstream 1.0kb upstream 1964 true Chr3: 8006508-8008471 Arabidopsis thaliana
AT3G22600 1.0kb upstream 1.0kb upstream 1000 false Chr3: 8007472-8008471 Arabidopsis thaliana
AT3G22600 1.0kb downstream 1.0kb downstream 1964 true Chr3: 8005508-8007471 Arabidopsis thaliana
AT3G22600 1.0kb downstream 1.0kb downstream 1000 false Chr3: 8005508-8006507 Arabidopsis thaliana
AT3G22600 2.0kb upstream 2.0kb upstream 2964 true Chr3: 8006508-8009471 Arabidopsis thaliana
AT3G22600 2.0kb upstream 2.0kb upstream 2000 false Chr3: 8007472-8009471 Arabidopsis thaliana
AT3G22600 2.0kb downstream 2.0kb downstream 2964 true Chr3: 8004508-8007471 Arabidopsis thaliana
AT3G22600 2.0kb downstream 2.0kb downstream 2000 false Chr3: 8004508-8006507 Arabidopsis thaliana
AT3G22600 5.0kb upstream 5.0kb upstream 5964 true Chr3: 8006508-8012471 Arabidopsis thaliana
AT3G22600 5.0kb upstream 5.0kb upstream 5000 false Chr3: 8007472-8012471 Arabidopsis thaliana
AT3G22600 5.0kb downstream 5.0kb downstream 5964 true Chr3: 8001508-8007471 Arabidopsis thaliana
AT3G22600 5.0kb downstream 5.0kb downstream 5000 false Chr3: 8001508-8006507 Arabidopsis thaliana
AT3G22600 10.0kb upstream 10.0kb upstream 10964 true Chr3: 8006508-8017471 Arabidopsis thaliana
AT3G22600 10.0kb upstream 10.0kb upstream 10000 false Chr3: 8007472-8017471 Arabidopsis thaliana
AT3G22600 10.0kb downstream 10.0kb downstream 10964 true Chr3: 7996508-8007471 Arabidopsis thaliana
AT3G22600 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7996508-8006507 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374270 5261 Brassicaceae View MSA
123834187 5264 Brassicales-Malvales View MSA
124341469 5266 SBM View MSA
124253918 5268 Malvidae View MSA
124071841 5270 Rosid View MSA
123750457 5271 Pentapetalae View MSA
122796784 5272 Eudicot View MSA
122044405 5273 Angiosperm View MSA
121350962 5274 Embryophyte View MSA
123381949 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 76.84     High  
cufflinks 35.093     High  
cufflinks 18.593       Low
cufflinks 71.935     High  
cufflinks 59.501     High  
cufflinks 103.345     High High

0 Strain