Gene : AT3G44570 A. thaliana TAIR10
Defline:  (1 of 3) PF03078 - ATHILA ORF-1 family (ATHILA) Genomic Order:  3427
Name:  ? AT3G44570 Secondary Identifier:  ? PAC:19659015
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G44570 0.5kb upstream 0.5kb upstream 1931 true Chr3: 16157905-16159835 Arabidopsis thaliana
AT3G44570 0.5kb upstream 0.5kb upstream 500 false Chr3: 16157905-16158404 Arabidopsis thaliana
AT3G44570 0.5kb downstream 0.5kb downstream 1931 true Chr3: 16158405-16160335 Arabidopsis thaliana
AT3G44570 0.5kb downstream 0.5kb downstream 500 false Chr3: 16159836-16160335 Arabidopsis thaliana
AT3G44570 1.0kb upstream 1.0kb upstream 2431 true Chr3: 16157405-16159835 Arabidopsis thaliana
AT3G44570 1.0kb upstream 1.0kb upstream 1000 false Chr3: 16157405-16158404 Arabidopsis thaliana
AT3G44570 1.0kb downstream 1.0kb downstream 2431 true Chr3: 16158405-16160835 Arabidopsis thaliana
AT3G44570 1.0kb downstream 1.0kb downstream 1000 false Chr3: 16159836-16160835 Arabidopsis thaliana
AT3G44570 2.0kb upstream 2.0kb upstream 3431 true Chr3: 16156405-16159835 Arabidopsis thaliana
AT3G44570 2.0kb upstream 2.0kb upstream 2000 false Chr3: 16156405-16158404 Arabidopsis thaliana
AT3G44570 2.0kb downstream 2.0kb downstream 3431 true Chr3: 16158405-16161835 Arabidopsis thaliana
AT3G44570 2.0kb downstream 2.0kb downstream 2000 false Chr3: 16159836-16161835 Arabidopsis thaliana
AT3G44570 5.0kb upstream 5.0kb upstream 6431 true Chr3: 16153405-16159835 Arabidopsis thaliana
AT3G44570 5.0kb upstream 5.0kb upstream 5000 false Chr3: 16153405-16158404 Arabidopsis thaliana
AT3G44570 5.0kb downstream 5.0kb downstream 6431 true Chr3: 16158405-16164835 Arabidopsis thaliana
AT3G44570 5.0kb downstream 5.0kb downstream 5000 false Chr3: 16159836-16164835 Arabidopsis thaliana
AT3G44570 10.0kb upstream 10.0kb upstream 11431 true Chr3: 16148405-16159835 Arabidopsis thaliana
AT3G44570 10.0kb upstream 10.0kb upstream 10000 false Chr3: 16148405-16158404 Arabidopsis thaliana
AT3G44570 10.0kb downstream 10.0kb downstream 11431 true Chr3: 16158405-16169835 Arabidopsis thaliana
AT3G44570 10.0kb downstream 10.0kb downstream 10000 false Chr3: 16159836-16169835 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121494142 5273 Angiosperm Singleton cluster - no MSA
122329715 5261 Brassicaceae Singleton cluster - no MSA
123771004 5264 Brassicales-Malvales Singleton cluster - no MSA
124269538 5266 SBM Singleton cluster - no MSA
124125671 5268 Malvidae Singleton cluster - no MSA
123854631 5270 Rosid Singleton cluster - no MSA
123440644 5271 Pentapetalae Singleton cluster - no MSA
122476229 5272 Eudicot Singleton cluster - no MSA
120767512 5274 Embryophyte Singleton cluster - no MSA
122809909 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain