Gene : AT3G21580 A. thaliana TAIR10
Defline:  (1 of 1) PTHR33514:SF3 - PROTEIN ABCI12, CHLOROPLASTIC Genomic Order:  2250
Name:  ? AT3G21580 Secondary Identifier:  ? PAC:19664081
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G21580 0.5kb upstream 0.5kb upstream 2417 true Chr3: 7601969-7604385 Arabidopsis thaliana
AT3G21580 0.5kb upstream 0.5kb upstream 500 false Chr3: 7603886-7604385 Arabidopsis thaliana
AT3G21580 0.5kb downstream 0.5kb downstream 2417 true Chr3: 7601469-7603885 Arabidopsis thaliana
AT3G21580 0.5kb downstream 0.5kb downstream 500 false Chr3: 7601469-7601968 Arabidopsis thaliana
AT3G21580 1.0kb upstream 1.0kb upstream 2917 true Chr3: 7601969-7604885 Arabidopsis thaliana
AT3G21580 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7603886-7604885 Arabidopsis thaliana
AT3G21580 1.0kb downstream 1.0kb downstream 2917 true Chr3: 7600969-7603885 Arabidopsis thaliana
AT3G21580 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7600969-7601968 Arabidopsis thaliana
AT3G21580 2.0kb upstream 2.0kb upstream 3917 true Chr3: 7601969-7605885 Arabidopsis thaliana
AT3G21580 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7603886-7605885 Arabidopsis thaliana
AT3G21580 2.0kb downstream 2.0kb downstream 3917 true Chr3: 7599969-7603885 Arabidopsis thaliana
AT3G21580 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7599969-7601968 Arabidopsis thaliana
AT3G21580 5.0kb upstream 5.0kb upstream 6917 true Chr3: 7601969-7608885 Arabidopsis thaliana
AT3G21580 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7603886-7608885 Arabidopsis thaliana
AT3G21580 5.0kb downstream 5.0kb downstream 6917 true Chr3: 7596969-7603885 Arabidopsis thaliana
AT3G21580 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7596969-7601968 Arabidopsis thaliana
AT3G21580 10.0kb upstream 10.0kb upstream 11917 true Chr3: 7601969-7613885 Arabidopsis thaliana
AT3G21580 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7603886-7613885 Arabidopsis thaliana
AT3G21580 10.0kb downstream 10.0kb downstream 11917 true Chr3: 7591969-7603885 Arabidopsis thaliana
AT3G21580 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7591969-7601968 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026580 5273 Angiosperm View MSA
122360667 5261 Brassicaceae View MSA
123828961 5264 Brassicales-Malvales View MSA
124341506 5266 SBM View MSA
124243311 5268 Malvidae View MSA
124068339 5270 Rosid View MSA
123746391 5271 Pentapetalae View MSA
122787556 5272 Eudicot View MSA
121347292 5274 Embryophyte View MSA
123426199 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.762       High
cufflinks 3.567        
cufflinks 8.142        
cufflinks 3.819        
cufflinks 7.387        
cufflinks 3.352       Low

0 Strain