Gene : AT3G20380 A. thaliana TAIR10
Defline:  (1 of 85) 3.4.19.12 - Ubiquitinyl hydrolase 1 / Ubiquitin thiolesterase Genomic Order:  2118
Name:  ? AT3G20380 Secondary Identifier:  ? PAC:19659629
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G20380 0.5kb upstream 0.5kb upstream 2318 true Chr3: 7107597-7109914 Arabidopsis thaliana
AT3G20380 0.5kb upstream 0.5kb upstream 500 false Chr3: 7107597-7108096 Arabidopsis thaliana
AT3G20380 0.5kb downstream 0.5kb downstream 2318 true Chr3: 7108097-7110414 Arabidopsis thaliana
AT3G20380 0.5kb downstream 0.5kb downstream 500 false Chr3: 7109915-7110414 Arabidopsis thaliana
AT3G20380 1.0kb upstream 1.0kb upstream 2818 true Chr3: 7107097-7109914 Arabidopsis thaliana
AT3G20380 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7107097-7108096 Arabidopsis thaliana
AT3G20380 1.0kb downstream 1.0kb downstream 2818 true Chr3: 7108097-7110914 Arabidopsis thaliana
AT3G20380 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7109915-7110914 Arabidopsis thaliana
AT3G20380 2.0kb upstream 2.0kb upstream 3818 true Chr3: 7106097-7109914 Arabidopsis thaliana
AT3G20380 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7106097-7108096 Arabidopsis thaliana
AT3G20380 2.0kb downstream 2.0kb downstream 3818 true Chr3: 7108097-7111914 Arabidopsis thaliana
AT3G20380 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7109915-7111914 Arabidopsis thaliana
AT3G20380 5.0kb upstream 5.0kb upstream 6818 true Chr3: 7103097-7109914 Arabidopsis thaliana
AT3G20380 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7103097-7108096 Arabidopsis thaliana
AT3G20380 5.0kb downstream 5.0kb downstream 6818 true Chr3: 7108097-7114914 Arabidopsis thaliana
AT3G20380 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7109915-7114914 Arabidopsis thaliana
AT3G20380 10.0kb upstream 10.0kb upstream 11818 true Chr3: 7098097-7109914 Arabidopsis thaliana
AT3G20380 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7098097-7108096 Arabidopsis thaliana
AT3G20380 10.0kb downstream 10.0kb downstream 11818 true Chr3: 7108097-7119914 Arabidopsis thaliana
AT3G20380 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7109915-7119914 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029521 5273 Angiosperm View MSA
122381924 5261 Brassicaceae View MSA
123803541 5264 Brassicales-Malvales View MSA
124300641 5266 SBM View MSA
124252315 5268 Malvidae View MSA
124073089 5270 Rosid View MSA
123752970 5271 Pentapetalae View MSA
122797935 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
121349273 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.025     Low  
cufflinks 8.462       High
cufflinks 0.026     Low  
cufflinks 13.352       High
cufflinks 0.017     Low  
cufflinks 1.668        

0 Strain