Gene : AT3G20300 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31963//PTHR31963:SF4 - FAMILY NOT NAMED // F11F12.5 PROTEIN Genomic Order:  2109
Name:  ? AT3G20300 Secondary Identifier:  ? PAC:19664881
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G20300 0.5kb upstream 0.5kb upstream 2805 true Chr3: 7079617-7082421 Arabidopsis thaliana
AT3G20300 0.5kb upstream 0.5kb upstream 500 false Chr3: 7081922-7082421 Arabidopsis thaliana
AT3G20300 0.5kb downstream 0.5kb downstream 2805 true Chr3: 7079117-7081921 Arabidopsis thaliana
AT3G20300 0.5kb downstream 0.5kb downstream 500 false Chr3: 7079117-7079616 Arabidopsis thaliana
AT3G20300 1.0kb upstream 1.0kb upstream 3305 true Chr3: 7079617-7082921 Arabidopsis thaliana
AT3G20300 1.0kb upstream 1.0kb upstream 1000 false Chr3: 7081922-7082921 Arabidopsis thaliana
AT3G20300 1.0kb downstream 1.0kb downstream 3305 true Chr3: 7078617-7081921 Arabidopsis thaliana
AT3G20300 1.0kb downstream 1.0kb downstream 1000 false Chr3: 7078617-7079616 Arabidopsis thaliana
AT3G20300 2.0kb upstream 2.0kb upstream 4305 true Chr3: 7079617-7083921 Arabidopsis thaliana
AT3G20300 2.0kb upstream 2.0kb upstream 2000 false Chr3: 7081922-7083921 Arabidopsis thaliana
AT3G20300 2.0kb downstream 2.0kb downstream 4305 true Chr3: 7077617-7081921 Arabidopsis thaliana
AT3G20300 2.0kb downstream 2.0kb downstream 2000 false Chr3: 7077617-7079616 Arabidopsis thaliana
AT3G20300 5.0kb upstream 5.0kb upstream 7305 true Chr3: 7079617-7086921 Arabidopsis thaliana
AT3G20300 5.0kb upstream 5.0kb upstream 5000 false Chr3: 7081922-7086921 Arabidopsis thaliana
AT3G20300 5.0kb downstream 5.0kb downstream 7305 true Chr3: 7074617-7081921 Arabidopsis thaliana
AT3G20300 5.0kb downstream 5.0kb downstream 5000 false Chr3: 7074617-7079616 Arabidopsis thaliana
AT3G20300 10.0kb upstream 10.0kb upstream 12305 true Chr3: 7079617-7091921 Arabidopsis thaliana
AT3G20300 10.0kb upstream 10.0kb upstream 10000 false Chr3: 7081922-7091921 Arabidopsis thaliana
AT3G20300 10.0kb downstream 10.0kb downstream 12305 true Chr3: 7069617-7081921 Arabidopsis thaliana
AT3G20300 10.0kb downstream 10.0kb downstream 10000 false Chr3: 7069617-7079616 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041284 5273 Angiosperm View MSA
122375256 5261 Brassicaceae View MSA
123827758 5264 Brassicales-Malvales View MSA
124342363 5266 SBM View MSA
124251317 5268 Malvidae View MSA
124067950 5270 Rosid View MSA
123751091 5271 Pentapetalae View MSA
122792359 5272 Eudicot View MSA
121349766 5274 Embryophyte View MSA
123381435 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.748        
cufflinks 2.587       Low
cufflinks 8.436        
cufflinks 4.674        
cufflinks 9.308        
cufflinks 3.669        

0 Strain