Gene : TOM40 A. thaliana TAIR10
Primary Identifier:  ? AT3G20000 Defline:  (1 of 2) K11518 - mitochondrial import receptor subunit TOM40 (TOM40)
Genomic Order:  2077 Name:  ? AT3G20000
Secondary Identifier:  ? PAC:19658989
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G20000 0.5kb upstream 0.5kb upstream 3485 true Chr3: 6967082-6970566 Arabidopsis thaliana
AT3G20000 0.5kb upstream 0.5kb upstream 500 false Chr3: 6967082-6967581 Arabidopsis thaliana
AT3G20000 0.5kb downstream 0.5kb downstream 3485 true Chr3: 6967582-6971066 Arabidopsis thaliana
AT3G20000 0.5kb downstream 0.5kb downstream 500 false Chr3: 6970567-6971066 Arabidopsis thaliana
AT3G20000 1.0kb upstream 1.0kb upstream 3985 true Chr3: 6966582-6970566 Arabidopsis thaliana
AT3G20000 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6966582-6967581 Arabidopsis thaliana
AT3G20000 1.0kb downstream 1.0kb downstream 3985 true Chr3: 6967582-6971566 Arabidopsis thaliana
AT3G20000 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6970567-6971566 Arabidopsis thaliana
AT3G20000 2.0kb upstream 2.0kb upstream 4985 true Chr3: 6965582-6970566 Arabidopsis thaliana
AT3G20000 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6965582-6967581 Arabidopsis thaliana
AT3G20000 2.0kb downstream 2.0kb downstream 4985 true Chr3: 6967582-6972566 Arabidopsis thaliana
AT3G20000 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6970567-6972566 Arabidopsis thaliana
AT3G20000 5.0kb upstream 5.0kb upstream 7985 true Chr3: 6962582-6970566 Arabidopsis thaliana
AT3G20000 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6962582-6967581 Arabidopsis thaliana
AT3G20000 5.0kb downstream 5.0kb downstream 7985 true Chr3: 6967582-6975566 Arabidopsis thaliana
AT3G20000 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6970567-6975566 Arabidopsis thaliana
AT3G20000 10.0kb upstream 10.0kb upstream 12985 true Chr3: 6957582-6970566 Arabidopsis thaliana
AT3G20000 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6957582-6967581 Arabidopsis thaliana
AT3G20000 10.0kb downstream 10.0kb downstream 12985 true Chr3: 6967582-6980566 Arabidopsis thaliana
AT3G20000 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6970567-6980566 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380040 5261 Brassicaceae View MSA
123838241 5264 Brassicales-Malvales View MSA
124340924 5266 SBM View MSA
124240553 5268 Malvidae View MSA
124062274 5270 Rosid View MSA
123746646 5271 Pentapetalae View MSA
122793036 5272 Eudicot View MSA
122044875 5273 Angiosperm View MSA
121346968 5274 Embryophyte View MSA
123428868 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.269        
cufflinks 24.124        
cufflinks 15.581        
cufflinks 25.696        
cufflinks 13.55       Low
cufflinks 26.909       High

0 Strain