Gene : AT3G19553 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11785:SF338 - POLYAMINE TRANSPORTER RMV1 Genomic Order:  2030
Name:  ? AT3G19553 Secondary Identifier:  ? PAC:19660613
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G19553 0.5kb upstream 0.5kb upstream 2678 true Chr3: 6790742-6793419 Arabidopsis thaliana
AT3G19553 0.5kb upstream 0.5kb upstream 500 false Chr3: 6792920-6793419 Arabidopsis thaliana
AT3G19553 0.5kb downstream 0.5kb downstream 2678 true Chr3: 6790242-6792919 Arabidopsis thaliana
AT3G19553 0.5kb downstream 0.5kb downstream 500 false Chr3: 6790242-6790741 Arabidopsis thaliana
AT3G19553 1.0kb upstream 1.0kb upstream 3178 true Chr3: 6790742-6793919 Arabidopsis thaliana
AT3G19553 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6792920-6793919 Arabidopsis thaliana
AT3G19553 1.0kb downstream 1.0kb downstream 3178 true Chr3: 6789742-6792919 Arabidopsis thaliana
AT3G19553 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6789742-6790741 Arabidopsis thaliana
AT3G19553 2.0kb upstream 2.0kb upstream 4178 true Chr3: 6790742-6794919 Arabidopsis thaliana
AT3G19553 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6792920-6794919 Arabidopsis thaliana
AT3G19553 2.0kb downstream 2.0kb downstream 4178 true Chr3: 6788742-6792919 Arabidopsis thaliana
AT3G19553 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6788742-6790741 Arabidopsis thaliana
AT3G19553 5.0kb upstream 5.0kb upstream 7178 true Chr3: 6790742-6797919 Arabidopsis thaliana
AT3G19553 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6792920-6797919 Arabidopsis thaliana
AT3G19553 5.0kb downstream 5.0kb downstream 7178 true Chr3: 6785742-6792919 Arabidopsis thaliana
AT3G19553 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6785742-6790741 Arabidopsis thaliana
AT3G19553 10.0kb upstream 10.0kb upstream 12178 true Chr3: 6790742-6802919 Arabidopsis thaliana
AT3G19553 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6792920-6802919 Arabidopsis thaliana
AT3G19553 10.0kb downstream 10.0kb downstream 12178 true Chr3: 6780742-6792919 Arabidopsis thaliana
AT3G19553 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6780742-6790741 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367548 5261 Brassicaceae View MSA
123834558 5264 Brassicales-Malvales View MSA
124340418 5266 SBM View MSA
124251423 5268 Malvidae View MSA
124068047 5270 Rosid View MSA
123738563 5271 Pentapetalae View MSA
122792232 5272 Eudicot View MSA
122042017 5273 Angiosperm View MSA
121345389 5274 Embryophyte View MSA
123424636 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.062     High  
cufflinks 14.006       Low
cufflinks 27.182     High  
cufflinks 14.638        
cufflinks 33.136     High High
cufflinks 15.151        

0 Strain