Gene : AT3G19680 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31317//PTHR31317:SF3 - FAMILY NOT NAMED // F2J10.8 PROTEIN-RELATED Genomic Order:  2046
Name:  ? AT3G19680 Secondary Identifier:  ? PAC:19661581
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G19680 0.5kb upstream 0.5kb upstream 2540 true Chr3: 6839781-6842320 Arabidopsis thaliana
AT3G19680 0.5kb upstream 0.5kb upstream 500 false Chr3: 6839781-6840280 Arabidopsis thaliana
AT3G19680 0.5kb downstream 0.5kb downstream 2540 true Chr3: 6840281-6842820 Arabidopsis thaliana
AT3G19680 0.5kb downstream 0.5kb downstream 500 false Chr3: 6842321-6842820 Arabidopsis thaliana
AT3G19680 1.0kb upstream 1.0kb upstream 3040 true Chr3: 6839281-6842320 Arabidopsis thaliana
AT3G19680 1.0kb upstream 1.0kb upstream 1000 false Chr3: 6839281-6840280 Arabidopsis thaliana
AT3G19680 1.0kb downstream 1.0kb downstream 3040 true Chr3: 6840281-6843320 Arabidopsis thaliana
AT3G19680 1.0kb downstream 1.0kb downstream 1000 false Chr3: 6842321-6843320 Arabidopsis thaliana
AT3G19680 2.0kb upstream 2.0kb upstream 4040 true Chr3: 6838281-6842320 Arabidopsis thaliana
AT3G19680 2.0kb upstream 2.0kb upstream 2000 false Chr3: 6838281-6840280 Arabidopsis thaliana
AT3G19680 2.0kb downstream 2.0kb downstream 4040 true Chr3: 6840281-6844320 Arabidopsis thaliana
AT3G19680 2.0kb downstream 2.0kb downstream 2000 false Chr3: 6842321-6844320 Arabidopsis thaliana
AT3G19680 5.0kb upstream 5.0kb upstream 7040 true Chr3: 6835281-6842320 Arabidopsis thaliana
AT3G19680 5.0kb upstream 5.0kb upstream 5000 false Chr3: 6835281-6840280 Arabidopsis thaliana
AT3G19680 5.0kb downstream 5.0kb downstream 7040 true Chr3: 6840281-6847320 Arabidopsis thaliana
AT3G19680 5.0kb downstream 5.0kb downstream 5000 false Chr3: 6842321-6847320 Arabidopsis thaliana
AT3G19680 10.0kb upstream 10.0kb upstream 12040 true Chr3: 6830281-6842320 Arabidopsis thaliana
AT3G19680 10.0kb upstream 10.0kb upstream 10000 false Chr3: 6830281-6840280 Arabidopsis thaliana
AT3G19680 10.0kb downstream 10.0kb downstream 12040 true Chr3: 6840281-6852320 Arabidopsis thaliana
AT3G19680 10.0kb downstream 10.0kb downstream 10000 false Chr3: 6842321-6852320 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361788 5261 Brassicaceae View MSA
123834580 5264 Brassicales-Malvales View MSA
124340750 5266 SBM View MSA
124246682 5268 Malvidae View MSA
124062839 5270 Rosid View MSA
123750808 5271 Pentapetalae View MSA
122792772 5272 Eudicot View MSA
122046200 5273 Angiosperm View MSA
121349583 5274 Embryophyte View MSA
123381364 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 66.539     High Low
cufflinks 154.711     High High
cufflinks 92.749     High  
cufflinks 97.993     High  
cufflinks 78.967     High  
cufflinks 105.949     High  

0 Strain