Gene : AT3G03880 A. thaliana TAIR10
Defline:  (1 of 9) PF07797 - Protein of unknown function (DUF1639) (DUF1639) Genomic Order:  329
Name:  ? AT3G03880 Secondary Identifier:  ? PAC:19662996
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G03880 0.5kb upstream 0.5kb upstream 1965 true Chr3: 997297-999261 Arabidopsis thaliana
AT3G03880 0.5kb upstream 0.5kb upstream 500 false Chr3: 997297-997796 Arabidopsis thaliana
AT3G03880 0.5kb downstream 0.5kb downstream 1965 true Chr3: 997797-999761 Arabidopsis thaliana
AT3G03880 0.5kb downstream 0.5kb downstream 500 false Chr3: 999262-999761 Arabidopsis thaliana
AT3G03880 1.0kb upstream 1.0kb upstream 2465 true Chr3: 996797-999261 Arabidopsis thaliana
AT3G03880 1.0kb upstream 1.0kb upstream 1000 false Chr3: 996797-997796 Arabidopsis thaliana
AT3G03880 1.0kb downstream 1.0kb downstream 2465 true Chr3: 997797-1000261 Arabidopsis thaliana
AT3G03880 1.0kb downstream 1.0kb downstream 1000 false Chr3: 999262-1000261 Arabidopsis thaliana
AT3G03880 2.0kb upstream 2.0kb upstream 3465 true Chr3: 995797-999261 Arabidopsis thaliana
AT3G03880 2.0kb upstream 2.0kb upstream 2000 false Chr3: 995797-997796 Arabidopsis thaliana
AT3G03880 2.0kb downstream 2.0kb downstream 3465 true Chr3: 997797-1001261 Arabidopsis thaliana
AT3G03880 2.0kb downstream 2.0kb downstream 2000 false Chr3: 999262-1001261 Arabidopsis thaliana
AT3G03880 5.0kb upstream 5.0kb upstream 6465 true Chr3: 992797-999261 Arabidopsis thaliana
AT3G03880 5.0kb upstream 5.0kb upstream 5000 false Chr3: 992797-997796 Arabidopsis thaliana
AT3G03880 5.0kb downstream 5.0kb downstream 6465 true Chr3: 997797-1004261 Arabidopsis thaliana
AT3G03880 5.0kb downstream 5.0kb downstream 5000 false Chr3: 999262-1004261 Arabidopsis thaliana
AT3G03880 10.0kb upstream 10.0kb upstream 11465 true Chr3: 987797-999261 Arabidopsis thaliana
AT3G03880 10.0kb upstream 10.0kb upstream 10000 false Chr3: 987797-997796 Arabidopsis thaliana
AT3G03880 10.0kb downstream 10.0kb downstream 11465 true Chr3: 997797-1009261 Arabidopsis thaliana
AT3G03880 10.0kb downstream 10.0kb downstream 10000 false Chr3: 999262-1009261 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367074 5261 Brassicaceae View MSA
123840768 5264 Brassicales-Malvales View MSA
124347872 5266 SBM View MSA
124252912 5268 Malvidae View MSA
124070296 5270 Rosid View MSA
123751978 5271 Pentapetalae View MSA
122788050 5272 Eudicot View MSA
122049023 5273 Angiosperm View MSA
121351496 5274 Embryophyte View MSA
123382191 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.13        
cufflinks 10.736        
cufflinks 9.205       Low
cufflinks 12.487       High
cufflinks 11.604        
cufflinks 9.851        

0 Strain