Gene : AT3G04020 A. thaliana TAIR10
Defline:  (1 of 3) PF10615 - Protein of unknown function (DUF2470) (DUF2470) Genomic Order:  343
Name:  ? AT3G04020 Secondary Identifier:  ? PAC:19661007
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G04020 0.5kb upstream 0.5kb upstream 2471 true Chr3: 1040048-1042518 Arabidopsis thaliana
AT3G04020 0.5kb upstream 0.5kb upstream 500 false Chr3: 1040048-1040547 Arabidopsis thaliana
AT3G04020 0.5kb downstream 0.5kb downstream 2471 true Chr3: 1040548-1043018 Arabidopsis thaliana
AT3G04020 0.5kb downstream 0.5kb downstream 500 false Chr3: 1042519-1043018 Arabidopsis thaliana
AT3G04020 1.0kb upstream 1.0kb upstream 2971 true Chr3: 1039548-1042518 Arabidopsis thaliana
AT3G04020 1.0kb upstream 1.0kb upstream 1000 false Chr3: 1039548-1040547 Arabidopsis thaliana
AT3G04020 1.0kb downstream 1.0kb downstream 2971 true Chr3: 1040548-1043518 Arabidopsis thaliana
AT3G04020 1.0kb downstream 1.0kb downstream 1000 false Chr3: 1042519-1043518 Arabidopsis thaliana
AT3G04020 2.0kb upstream 2.0kb upstream 3971 true Chr3: 1038548-1042518 Arabidopsis thaliana
AT3G04020 2.0kb upstream 2.0kb upstream 2000 false Chr3: 1038548-1040547 Arabidopsis thaliana
AT3G04020 2.0kb downstream 2.0kb downstream 3971 true Chr3: 1040548-1044518 Arabidopsis thaliana
AT3G04020 2.0kb downstream 2.0kb downstream 2000 false Chr3: 1042519-1044518 Arabidopsis thaliana
AT3G04020 5.0kb upstream 5.0kb upstream 6971 true Chr3: 1035548-1042518 Arabidopsis thaliana
AT3G04020 5.0kb upstream 5.0kb upstream 5000 false Chr3: 1035548-1040547 Arabidopsis thaliana
AT3G04020 5.0kb downstream 5.0kb downstream 6971 true Chr3: 1040548-1047518 Arabidopsis thaliana
AT3G04020 5.0kb downstream 5.0kb downstream 5000 false Chr3: 1042519-1047518 Arabidopsis thaliana
AT3G04020 10.0kb upstream 10.0kb upstream 11971 true Chr3: 1030548-1042518 Arabidopsis thaliana
AT3G04020 10.0kb upstream 10.0kb upstream 10000 false Chr3: 1030548-1040547 Arabidopsis thaliana
AT3G04020 10.0kb downstream 10.0kb downstream 11971 true Chr3: 1040548-1052518 Arabidopsis thaliana
AT3G04020 10.0kb downstream 10.0kb downstream 10000 false Chr3: 1042519-1052518 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366319 5261 Brassicaceae View MSA
123832650 5264 Brassicales-Malvales View MSA
124338978 5266 SBM View MSA
124240796 5268 Malvidae View MSA
124068893 5270 Rosid View MSA
123739239 5271 Pentapetalae View MSA
122792420 5272 Eudicot View MSA
122046024 5273 Angiosperm View MSA
121347558 5274 Embryophyte View MSA
123380572 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.171        
cufflinks 2.917        
cufflinks 2.414       Low
cufflinks 3.188        
cufflinks 2.293       Low
cufflinks 3.11        

0 Strain