Gene : AT3G03560 A. thaliana TAIR10
Defline:  (1 of 4) PF16709 - Fused Ig-PH domain of plant-specific actin-binding protein (SCAB-IgPH) Genomic Order:  290
Name:  ? AT3G03560 Secondary Identifier:  ? PAC:19660096
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G03560 0.5kb upstream 0.5kb upstream 4077 true Chr3: 852910-856986 Arabidopsis thaliana
AT3G03560 0.5kb upstream 0.5kb upstream 500 false Chr3: 856487-856986 Arabidopsis thaliana
AT3G03560 0.5kb downstream 0.5kb downstream 4077 true Chr3: 852410-856486 Arabidopsis thaliana
AT3G03560 0.5kb downstream 0.5kb downstream 500 false Chr3: 852410-852909 Arabidopsis thaliana
AT3G03560 1.0kb upstream 1.0kb upstream 4577 true Chr3: 852910-857486 Arabidopsis thaliana
AT3G03560 1.0kb upstream 1.0kb upstream 1000 false Chr3: 856487-857486 Arabidopsis thaliana
AT3G03560 1.0kb downstream 1.0kb downstream 4577 true Chr3: 851910-856486 Arabidopsis thaliana
AT3G03560 1.0kb downstream 1.0kb downstream 1000 false Chr3: 851910-852909 Arabidopsis thaliana
AT3G03560 2.0kb upstream 2.0kb upstream 5577 true Chr3: 852910-858486 Arabidopsis thaliana
AT3G03560 2.0kb upstream 2.0kb upstream 2000 false Chr3: 856487-858486 Arabidopsis thaliana
AT3G03560 2.0kb downstream 2.0kb downstream 5577 true Chr3: 850910-856486 Arabidopsis thaliana
AT3G03560 2.0kb downstream 2.0kb downstream 2000 false Chr3: 850910-852909 Arabidopsis thaliana
AT3G03560 5.0kb upstream 5.0kb upstream 8577 true Chr3: 852910-861486 Arabidopsis thaliana
AT3G03560 5.0kb upstream 5.0kb upstream 5000 false Chr3: 856487-861486 Arabidopsis thaliana
AT3G03560 5.0kb downstream 5.0kb downstream 8577 true Chr3: 847910-856486 Arabidopsis thaliana
AT3G03560 5.0kb downstream 5.0kb downstream 5000 false Chr3: 847910-852909 Arabidopsis thaliana
AT3G03560 10.0kb upstream 10.0kb upstream 13577 true Chr3: 852910-866486 Arabidopsis thaliana
AT3G03560 10.0kb upstream 10.0kb upstream 10000 false Chr3: 856487-866486 Arabidopsis thaliana
AT3G03560 10.0kb downstream 10.0kb downstream 13577 true Chr3: 842910-856486 Arabidopsis thaliana
AT3G03560 10.0kb downstream 10.0kb downstream 10000 false Chr3: 842910-852909 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369669 5261 Brassicaceae View MSA
123833746 5264 Brassicales-Malvales View MSA
124321894 5266 SBM View MSA
124241779 5268 Malvidae View MSA
124074724 5270 Rosid View MSA
123742844 5271 Pentapetalae View MSA
122770408 5272 Eudicot View MSA
122044281 5273 Angiosperm View MSA
121310265 5274 Embryophyte View MSA
123347803 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 21.755       High
cufflinks 10.711        
cufflinks 10.627        
cufflinks 11.577        
cufflinks 14.559        
cufflinks 10.471        

0 Strain