Gene : EXPA13 A. thaliana TAIR10
Primary Identifier:  ? AT3G03220 Defline:  (1 of 1) PTHR31867//PTHR31867:SF3 - FAMILY NOT NAMED // EXPANSIN-A13
Genomic Order:  252 Name:  ? AT3G03220
Secondary Identifier:  ? PAC:19661505
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Expression

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5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G03220 0.5kb upstream 0.5kb upstream 2194 true Chr3: 742354-744547 Arabidopsis thaliana
AT3G03220 0.5kb upstream 0.5kb upstream 500 false Chr3: 744048-744547 Arabidopsis thaliana
AT3G03220 0.5kb downstream 0.5kb downstream 2194 true Chr3: 741854-744047 Arabidopsis thaliana
AT3G03220 0.5kb downstream 0.5kb downstream 500 false Chr3: 741854-742353 Arabidopsis thaliana
AT3G03220 1.0kb upstream 1.0kb upstream 2694 true Chr3: 742354-745047 Arabidopsis thaliana
AT3G03220 1.0kb upstream 1.0kb upstream 1000 false Chr3: 744048-745047 Arabidopsis thaliana
AT3G03220 1.0kb downstream 1.0kb downstream 2694 true Chr3: 741354-744047 Arabidopsis thaliana
AT3G03220 1.0kb downstream 1.0kb downstream 1000 false Chr3: 741354-742353 Arabidopsis thaliana
AT3G03220 2.0kb upstream 2.0kb upstream 3694 true Chr3: 742354-746047 Arabidopsis thaliana
AT3G03220 2.0kb upstream 2.0kb upstream 2000 false Chr3: 744048-746047 Arabidopsis thaliana
AT3G03220 2.0kb downstream 2.0kb downstream 3694 true Chr3: 740354-744047 Arabidopsis thaliana
AT3G03220 2.0kb downstream 2.0kb downstream 2000 false Chr3: 740354-742353 Arabidopsis thaliana
AT3G03220 5.0kb upstream 5.0kb upstream 6694 true Chr3: 742354-749047 Arabidopsis thaliana
AT3G03220 5.0kb upstream 5.0kb upstream 5000 false Chr3: 744048-749047 Arabidopsis thaliana
AT3G03220 5.0kb downstream 5.0kb downstream 6694 true Chr3: 737354-744047 Arabidopsis thaliana
AT3G03220 5.0kb downstream 5.0kb downstream 5000 false Chr3: 737354-742353 Arabidopsis thaliana
AT3G03220 10.0kb upstream 10.0kb upstream 11694 true Chr3: 742354-754047 Arabidopsis thaliana
AT3G03220 10.0kb upstream 10.0kb upstream 10000 false Chr3: 744048-754047 Arabidopsis thaliana
AT3G03220 10.0kb downstream 10.0kb downstream 11694 true Chr3: 732354-744047 Arabidopsis thaliana
AT3G03220 10.0kb downstream 10.0kb downstream 10000 false Chr3: 732354-742353 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364881 5261 Brassicaceae View MSA
123829303 5264 Brassicales-Malvales View MSA
124339776 5266 SBM View MSA
124240059 5268 Malvidae View MSA
124061615 5270 Rosid View MSA
123746743 5271 Pentapetalae View MSA
122791118 5272 Eudicot View MSA
122045799 5273 Angiosperm View MSA
123429074 5275 Viridiplantae View MSA
121310504 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.996        
cufflinks 21.737        
cufflinks 4.887        
cufflinks 17.725        
cufflinks 4.558       Low
cufflinks 21.961        

0 Strain