Gene : AT3G02070 A. thaliana TAIR10
Defline:  (1 of 1) PTHR12419//PTHR12419:SF3 - OTU DOMAIN CONTAINING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  129
Name:  ? AT3G02070 Secondary Identifier:  ? PAC:19660335
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G02070 0.5kb upstream 0.5kb upstream 3009 true Chr3: 360421-363429 Arabidopsis thaliana
AT3G02070 0.5kb upstream 0.5kb upstream 500 false Chr3: 360421-360920 Arabidopsis thaliana
AT3G02070 0.5kb downstream 0.5kb downstream 3009 true Chr3: 360921-363929 Arabidopsis thaliana
AT3G02070 0.5kb downstream 0.5kb downstream 500 false Chr3: 363430-363929 Arabidopsis thaliana
AT3G02070 1.0kb upstream 1.0kb upstream 3509 true Chr3: 359921-363429 Arabidopsis thaliana
AT3G02070 1.0kb upstream 1.0kb upstream 1000 false Chr3: 359921-360920 Arabidopsis thaliana
AT3G02070 1.0kb downstream 1.0kb downstream 3509 true Chr3: 360921-364429 Arabidopsis thaliana
AT3G02070 1.0kb downstream 1.0kb downstream 1000 false Chr3: 363430-364429 Arabidopsis thaliana
AT3G02070 2.0kb upstream 2.0kb upstream 4509 true Chr3: 358921-363429 Arabidopsis thaliana
AT3G02070 2.0kb upstream 2.0kb upstream 2000 false Chr3: 358921-360920 Arabidopsis thaliana
AT3G02070 2.0kb downstream 2.0kb downstream 4509 true Chr3: 360921-365429 Arabidopsis thaliana
AT3G02070 2.0kb downstream 2.0kb downstream 2000 false Chr3: 363430-365429 Arabidopsis thaliana
AT3G02070 5.0kb upstream 5.0kb upstream 7509 true Chr3: 355921-363429 Arabidopsis thaliana
AT3G02070 5.0kb upstream 5.0kb upstream 5000 false Chr3: 355921-360920 Arabidopsis thaliana
AT3G02070 5.0kb downstream 5.0kb downstream 7509 true Chr3: 360921-368429 Arabidopsis thaliana
AT3G02070 5.0kb downstream 5.0kb downstream 5000 false Chr3: 363430-368429 Arabidopsis thaliana
AT3G02070 10.0kb upstream 10.0kb upstream 12509 true Chr3: 350921-363429 Arabidopsis thaliana
AT3G02070 10.0kb upstream 10.0kb upstream 10000 false Chr3: 350921-360920 Arabidopsis thaliana
AT3G02070 10.0kb downstream 10.0kb downstream 12509 true Chr3: 360921-373429 Arabidopsis thaliana
AT3G02070 10.0kb downstream 10.0kb downstream 10000 false Chr3: 363430-373429 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377423 5261 Brassicaceae View MSA
123840223 5264 Brassicales-Malvales View MSA
124340656 5266 SBM View MSA
124239672 5268 Malvidae View MSA
124068845 5270 Rosid View MSA
123751936 5271 Pentapetalae View MSA
122788372 5272 Eudicot View MSA
122048999 5273 Angiosperm View MSA
121348332 5274 Embryophyte View MSA
123428461 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.618        
cufflinks 15.694       High
cufflinks 8.425       Low
cufflinks 13.397        
cufflinks 8.689        
cufflinks 14.241        

0 Strain