Gene : AT3G01590 A. thaliana TAIR10
Defline:  (1 of 2) PTHR11122:SF21 - ALDOSE 1-EPIMERASE FAMILY PROTEIN-RELATED Genomic Order:  79
Name:  ? AT3G01590 Secondary Identifier:  ? PAC:19663016
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G01590 0.5kb upstream 0.5kb upstream 3208 true Chr3: 225416-228623 Arabidopsis thaliana
AT3G01590 0.5kb upstream 0.5kb upstream 500 false Chr3: 225416-225915 Arabidopsis thaliana
AT3G01590 0.5kb downstream 0.5kb downstream 3208 true Chr3: 225916-229123 Arabidopsis thaliana
AT3G01590 0.5kb downstream 0.5kb downstream 500 false Chr3: 228624-229123 Arabidopsis thaliana
AT3G01590 1.0kb upstream 1.0kb upstream 3708 true Chr3: 224916-228623 Arabidopsis thaliana
AT3G01590 1.0kb upstream 1.0kb upstream 1000 false Chr3: 224916-225915 Arabidopsis thaliana
AT3G01590 1.0kb downstream 1.0kb downstream 3708 true Chr3: 225916-229623 Arabidopsis thaliana
AT3G01590 1.0kb downstream 1.0kb downstream 1000 false Chr3: 228624-229623 Arabidopsis thaliana
AT3G01590 2.0kb upstream 2.0kb upstream 4708 true Chr3: 223916-228623 Arabidopsis thaliana
AT3G01590 2.0kb upstream 2.0kb upstream 2000 false Chr3: 223916-225915 Arabidopsis thaliana
AT3G01590 2.0kb downstream 2.0kb downstream 4708 true Chr3: 225916-230623 Arabidopsis thaliana
AT3G01590 2.0kb downstream 2.0kb downstream 2000 false Chr3: 228624-230623 Arabidopsis thaliana
AT3G01590 5.0kb upstream 5.0kb upstream 7708 true Chr3: 220916-228623 Arabidopsis thaliana
AT3G01590 5.0kb upstream 5.0kb upstream 5000 false Chr3: 220916-225915 Arabidopsis thaliana
AT3G01590 5.0kb downstream 5.0kb downstream 7708 true Chr3: 225916-233623 Arabidopsis thaliana
AT3G01590 5.0kb downstream 5.0kb downstream 5000 false Chr3: 228624-233623 Arabidopsis thaliana
AT3G01590 10.0kb upstream 10.0kb upstream 12708 true Chr3: 215916-228623 Arabidopsis thaliana
AT3G01590 10.0kb upstream 10.0kb upstream 10000 false Chr3: 215916-225915 Arabidopsis thaliana
AT3G01590 10.0kb downstream 10.0kb downstream 12708 true Chr3: 225916-238623 Arabidopsis thaliana
AT3G01590 10.0kb downstream 10.0kb downstream 10000 false Chr3: 228624-238623 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361412 5261 Brassicaceae View MSA
123838276 5264 Brassicales-Malvales View MSA
124345395 5266 SBM View MSA
124238410 5268 Malvidae View MSA
124066118 5270 Rosid View MSA
123736939 5271 Pentapetalae View MSA
122788781 5272 Eudicot View MSA
122046628 5273 Angiosperm View MSA
121310634 5274 Embryophyte View MSA
123428689 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.947        
cufflinks 8.758        
cufflinks 5.544       Low
cufflinks 9.311       High
cufflinks 5.938        
cufflinks 7.661        

0 Strain