Gene : HB-1 A. thaliana TAIR10

Primary Identifier:  ? AT3G01470 Defline:  (1 of 2) PTHR24326:SF136 - HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-54-RELATED
Genomic Order:  64 Name:  ? AT3G01470
Secondary Identifier:  ? PAC:19660222

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0 Pathways

Genomics

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Expression

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Other

5 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT3G01470 0.5kb upstream 0.5kb upstream 2508 true Chr3: 182396-184903 Arabidopsis thaliana
AT3G01470 0.5kb upstream 0.5kb upstream 500 false Chr3: 184404-184903 Arabidopsis thaliana
AT3G01470 0.5kb downstream 0.5kb downstream 2508 true Chr3: 181896-184403 Arabidopsis thaliana
AT3G01470 0.5kb downstream 0.5kb downstream 500 false Chr3: 181896-182395 Arabidopsis thaliana
AT3G01470 1.0kb upstream 1.0kb upstream 3008 true Chr3: 182396-185403 Arabidopsis thaliana
AT3G01470 1.0kb upstream 1.0kb upstream 1000 false Chr3: 184404-185403 Arabidopsis thaliana
AT3G01470 1.0kb downstream 1.0kb downstream 3008 true Chr3: 181396-184403 Arabidopsis thaliana
AT3G01470 1.0kb downstream 1.0kb downstream 1000 false Chr3: 181396-182395 Arabidopsis thaliana
AT3G01470 2.0kb upstream 2.0kb upstream 4008 true Chr3: 182396-186403 Arabidopsis thaliana
AT3G01470 2.0kb upstream 2.0kb upstream 2000 false Chr3: 184404-186403 Arabidopsis thaliana
AT3G01470 2.0kb downstream 2.0kb downstream 4008 true Chr3: 180396-184403 Arabidopsis thaliana
AT3G01470 2.0kb downstream 2.0kb downstream 2000 false Chr3: 180396-182395 Arabidopsis thaliana
AT3G01470 5.0kb upstream 5.0kb upstream 7008 true Chr3: 182396-189403 Arabidopsis thaliana
AT3G01470 5.0kb upstream 5.0kb upstream 5000 false Chr3: 184404-189403 Arabidopsis thaliana
AT3G01470 5.0kb downstream 5.0kb downstream 7008 true Chr3: 177396-184403 Arabidopsis thaliana
AT3G01470 5.0kb downstream 5.0kb downstream 5000 false Chr3: 177396-182395 Arabidopsis thaliana
AT3G01470 10.0kb upstream 10.0kb upstream 12008 true Chr3: 182396-194403 Arabidopsis thaliana
AT3G01470 10.0kb upstream 10.0kb upstream 10000 false Chr3: 184404-194403 Arabidopsis thaliana
AT3G01470 10.0kb downstream 10.0kb downstream 12008 true Chr3: 172396-184403 Arabidopsis thaliana
AT3G01470 10.0kb downstream 10.0kb downstream 10000 false Chr3: 172396-182395 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379134 5261 Brassicaceae View MSA
123841004 5264 Brassicales-Malvales View MSA
124347057 5266 SBM View MSA
124248110 5268 Malvidae View MSA
124070886 5270 Rosid View MSA
123751160 5271 Pentapetalae View MSA
122797641 5272 Eudicot View MSA
122048587 5273 Angiosperm View MSA
121351579 5274 Embryophyte View MSA
123382235 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain